Gene Spea_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2170 
Symbol 
ID5662563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2626720 
End bp2627925 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content48% 
IMG OID641236773 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001502025 
Protein GI157961991 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAG CAGTGATCGT CTCCGTTGCA CGTACCGCAT TAAGCAAATC TTTTCGTGGC 
GCATTTAATG ATACTGAAGC CCCGGTTCTT GGTGGCCATG TTGTCAAGTC TGTCGTTGAG
CGTGCTGGTA TTGACCCTAA GTCTATCGAT GATGTGATTA TGGGCGCAGC AGCCCAGCAG
GGGACCCAAT CCTACAACAT TGGCAGACTC TCAGCTTATA CCGCTGGCCT ACCCGATACC
GTATCAGGCA TGGCACTAGA CCGTATGTGC GCATCGGGTT TAATGAGTAT TGGTGTTGCA
GCAAAATCGA TTATGACTGA CGAGATGAGC ACCGTTGTTG CCGGTGGCGT TGAGTCGTTA
TCGTTAACCC AAAATAAATA TAAGAATACT TATCGAGCAC AGTCTCAAGC GGCAATTGCT
GCAATGCCTA GTGCTTACAT TCAAATGATC GAAACTGCCG AAATTGTCGC AGAGCGCTAC
GGCATCAGTC GTCAGGCTCA AGATGAATAC TCGCTGCTAA GTCAGCAACG CACCGCTAGC
GCCCAGCAAG CGGGTTACTT TAATGATGAA ATTGTACCGA TTACTGTTCA GCAACTGACC
TTTGATGAAA ACCGCCAACC AGCAGGCCAT AAAGAAACGA TTGCGTTACA AGACGATTGT
AATAGACCGC AAACAACGCT AGACAGTTTG TCTAATCTTG CTCCTGTTTG GAAAGGTGGC
GAGTGGACTG GCGAAGGCCG CAATGTTACC GCGGGCAATG CATCACAGTT TGCCGATGGC
GCAGCGGCAA GTTTATTAAT GAGTAAAACC CAAGCAGCAA GCCTTGGTAT TGCCCCCTTA
GGAACTTACA AAGGTATTGC CGTAGCAGGT TGTGCCCCAG AAGAGATGGG AATAGGTCCG
GTGCTCGCTA TCCCCAAACT GTTAAAGCGT TTTGGTCTGA CCATTGATGA TATAGGTCTG
TGGGAGATCA ATGAAGCCTT TGCAAGCCAA GTTGTTTATT GCCAACACAA GTTAGAGATC
CCCGCCGATA GATTAAATGT AAATGGCGGC GCTATTTCTA TTGGGCACCC ATTTGGTATG
TCTGGCGCTC GTATGGTGGG TCATGCACTG ATTGAAGGCA GGCGTCGAGG CGTTAAATAC
GTTGTTGTAG CAATGTGTAT TGGCGGTGGT ATGGGCGCAG CAGGACTCTT TGAAGTCAAT
CAGTAA
 
Protein sequence
MTEAVIVSVA RTALSKSFRG AFNDTEAPVL GGHVVKSVVE RAGIDPKSID DVIMGAAAQQ 
GTQSYNIGRL SAYTAGLPDT VSGMALDRMC ASGLMSIGVA AKSIMTDEMS TVVAGGVESL
SLTQNKYKNT YRAQSQAAIA AMPSAYIQMI ETAEIVAERY GISRQAQDEY SLLSQQRTAS
AQQAGYFNDE IVPITVQQLT FDENRQPAGH KETIALQDDC NRPQTTLDSL SNLAPVWKGG
EWTGEGRNVT AGNASQFADG AAASLLMSKT QAASLGIAPL GTYKGIAVAG CAPEEMGIGP
VLAIPKLLKR FGLTIDDIGL WEINEAFASQ VVYCQHKLEI PADRLNVNGG AISIGHPFGM
SGARMVGHAL IEGRRRGVKY VVVAMCIGGG MGAAGLFEVN Q