Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2170 |
Symbol | |
ID | 5662563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2626720 |
End bp | 2627925 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641236773 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_001502025 |
Protein GI | 157961991 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGAAG CAGTGATCGT CTCCGTTGCA CGTACCGCAT TAAGCAAATC TTTTCGTGGC GCATTTAATG ATACTGAAGC CCCGGTTCTT GGTGGCCATG TTGTCAAGTC TGTCGTTGAG CGTGCTGGTA TTGACCCTAA GTCTATCGAT GATGTGATTA TGGGCGCAGC AGCCCAGCAG GGGACCCAAT CCTACAACAT TGGCAGACTC TCAGCTTATA CCGCTGGCCT ACCCGATACC GTATCAGGCA TGGCACTAGA CCGTATGTGC GCATCGGGTT TAATGAGTAT TGGTGTTGCA GCAAAATCGA TTATGACTGA CGAGATGAGC ACCGTTGTTG CCGGTGGCGT TGAGTCGTTA TCGTTAACCC AAAATAAATA TAAGAATACT TATCGAGCAC AGTCTCAAGC GGCAATTGCT GCAATGCCTA GTGCTTACAT TCAAATGATC GAAACTGCCG AAATTGTCGC AGAGCGCTAC GGCATCAGTC GTCAGGCTCA AGATGAATAC TCGCTGCTAA GTCAGCAACG CACCGCTAGC GCCCAGCAAG CGGGTTACTT TAATGATGAA ATTGTACCGA TTACTGTTCA GCAACTGACC TTTGATGAAA ACCGCCAACC AGCAGGCCAT AAAGAAACGA TTGCGTTACA AGACGATTGT AATAGACCGC AAACAACGCT AGACAGTTTG TCTAATCTTG CTCCTGTTTG GAAAGGTGGC GAGTGGACTG GCGAAGGCCG CAATGTTACC GCGGGCAATG CATCACAGTT TGCCGATGGC GCAGCGGCAA GTTTATTAAT GAGTAAAACC CAAGCAGCAA GCCTTGGTAT TGCCCCCTTA GGAACTTACA AAGGTATTGC CGTAGCAGGT TGTGCCCCAG AAGAGATGGG AATAGGTCCG GTGCTCGCTA TCCCCAAACT GTTAAAGCGT TTTGGTCTGA CCATTGATGA TATAGGTCTG TGGGAGATCA ATGAAGCCTT TGCAAGCCAA GTTGTTTATT GCCAACACAA GTTAGAGATC CCCGCCGATA GATTAAATGT AAATGGCGGC GCTATTTCTA TTGGGCACCC ATTTGGTATG TCTGGCGCTC GTATGGTGGG TCATGCACTG ATTGAAGGCA GGCGTCGAGG CGTTAAATAC GTTGTTGTAG CAATGTGTAT TGGCGGTGGT ATGGGCGCAG CAGGACTCTT TGAAGTCAAT CAGTAA
|
Protein sequence | MTEAVIVSVA RTALSKSFRG AFNDTEAPVL GGHVVKSVVE RAGIDPKSID DVIMGAAAQQ GTQSYNIGRL SAYTAGLPDT VSGMALDRMC ASGLMSIGVA AKSIMTDEMS TVVAGGVESL SLTQNKYKNT YRAQSQAAIA AMPSAYIQMI ETAEIVAERY GISRQAQDEY SLLSQQRTAS AQQAGYFNDE IVPITVQQLT FDENRQPAGH KETIALQDDC NRPQTTLDSL SNLAPVWKGG EWTGEGRNVT AGNASQFADG AAASLLMSKT QAASLGIAPL GTYKGIAVAG CAPEEMGIGP VLAIPKLLKR FGLTIDDIGL WEINEAFASQ VVYCQHKLEI PADRLNVNGG AISIGHPFGM SGARMVGHAL IEGRRRGVKY VVVAMCIGGG MGAAGLFEVN Q
|
| |