Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2141 |
Symbol | |
ID | 5662534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2592491 |
End bp | 2593669 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641236744 |
Product | lipid-transfer protein |
Protein accession | YP_001501996 |
Protein GI | 157961962 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.219592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCAT CGATCAGTGG TAAGGCTGCT ATTGTTGGTT TAGGCGCTAC TGAGTTTTCT AAAAACTCTG GCCGTACAGA ATTACGTTTG GCAATGGAAG CAACATTATC GGCACTTAAA GATGCCGGGA TTGACCCGAG TGAAGTTGAC GGTTTCTGCT CTTATTCTGT AGATAAAGTG CCAGAGTATG AAGTGGCTCG TTTACTCGGC TGTAAGGAAG TCAAGTTTTT CTCCCAAATC CCTCATGGCG GTGGCGCTGC GTGTGCACCG GTTATGCATG CCGCTATGGC TGTCGCCTCT GGTGTGGCTA AAACCGTTGT GGTGTATCGT GCGATGAACG AGCGCTCTTG GTATCGATTT GGTACCGGGG ATTATGGTTT CGCTAATACG CCGACATTTG AAAATGTAAA TTATGGTTGG TATATGCCTC ATGGTTTTCA TACGCCCGCA TCATGGGTCG GTATGTTCGC CCAGCGATAT ATGCATGAAT ATGGCGCGAC ATCAGAAGAT TTCGGACGCA TAGCCGTTGC GGCGCGAGAC TTTGCGGCGA CCAATCCCGC CGCGTTCTTC CATAATAAGC CGATTACTTT AGAGGAACAC CAAGCGTCAA GATGGATCTG TGAACCATTA CATTTGCTTG ACTGCTGCCA AGAGTCAGAT GGAGCGGTTG CTATGGTGAT CACCAGTGCA GAGCGAGCAA AAGATTTAAA GCAGAAAAGC GTGGTGATAA AAGCCGGCGC CCAAGGTATT GCACAAGGGC AGCAAGTGAT GACTTCATTT TATCGTGACG ATATTACCGG ACTGCCTGAA ATGGGCATTG TCGCAAAAGA GCTCTACAAG CAATCAAAGT TAACTCCTGA AGACTTCCAG ACTGCAGTCA TCTATGACCA CTTTACCCCA TTTGTATTGC CACAACTTGA AGAGTTTGGT TTTGCTAAAC GCGGACAAGC GAAAGAGTTT ATCCGTGCAG GCGAGCATGC TCGAGGTGGA AAGTTGCCGA TTAACACCCA TGGTGGCCAG CTTGGCGAAG CCTATATTCA CGGTATGAAC GGTATCGCAG AGGCGGTACG CCAAGTACGT GGCTCTGCGG TCAATCAAGT CGATGATGTT GAGAACGTAT TAGTTACAGC TGGAACAGGC GTGCCAACCA GTGGCCTGAT TTTAAGTGCG GAGGCTTAG
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Protein sequence | MDASISGKAA IVGLGATEFS KNSGRTELRL AMEATLSALK DAGIDPSEVD GFCSYSVDKV PEYEVARLLG CKEVKFFSQI PHGGGAACAP VMHAAMAVAS GVAKTVVVYR AMNERSWYRF GTGDYGFANT PTFENVNYGW YMPHGFHTPA SWVGMFAQRY MHEYGATSED FGRIAVAARD FAATNPAAFF HNKPITLEEH QASRWICEPL HLLDCCQESD GAVAMVITSA ERAKDLKQKS VVIKAGAQGI AQGQQVMTSF YRDDITGLPE MGIVAKELYK QSKLTPEDFQ TAVIYDHFTP FVLPQLEEFG FAKRGQAKEF IRAGEHARGG KLPINTHGGQ LGEAYIHGMN GIAEAVRQVR GSAVNQVDDV ENVLVTAGTG VPTSGLILSA EA
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