Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2138 |
Symbol | |
ID | 5662531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2589931 |
End bp | 2590896 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236741 |
Product | hypothetical protein |
Protein accession | YP_001501993 |
Protein GI | 157961959 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAA TACGCACTTT AGTAGGCACA GAGTACGACC GTATATACGC ATGGGATGCT ATCAACCCTG CGATGGTAAG GCAATGGTGC GAAGTCATGG GAATTGATAA CCCACTTTAT ACCGATGAAC AATACGCATT AACAACAGAG TTTGAAGGCA TTGTTGCACC GCCTTCAATG TTACAGACGT GGTGTTTAGC CGGGTTTAAC GATGTTTGTG CGCCGGGGTC TTCAGAAGAA AACCCTTACG GCGTACTGAA ATTATTGGAG GCACAAGGCT ACCCAGCGGT TGTTGCGGTT AATTCTGAAC TCGATTTTAA ACGATATTTA AAAATGGGCG AGAAGCTTTG TTACACCACA AAATTAGAGT CAATTAGCGA AGAAAAAACC ACCGGCCTTG GGGTTGGATA CTTTGTCACT TTTATCATGA CTTATTTTTC AACTCATAAC GATGGTGAAG AAGAATTGGT CGGCACTTTA TTATTTAGAG TGTTTAAATT TAAACCAGCA GCTCGCGCAG AATCCACGCC TGAAGTAAAA CAGGATCCAA AGCCTGCTGC CAAAGTGTAT AAGCGACCAA AGCCTGGGAT CAGCGATGAT AATCGGTTCT TCTGGGATGG CTGTAATCAA CATGAACTTC GTATCCAGCA CTGTACTTGT TGCGACAAAC TACAGCATCC ACCGGCACCG ATATGTATGC ATTGTCAGTC GTTCGAGCTA GACCATAAAG TGGTTAGCGG TAAGGGGAGT ATCTTCTCTT TTGTGGTGAT GCATTATCCA GAAGTCCCAC CATTTGAGCA CCCGAACCCA ATCGCTCTCG TCGAATTAGA AGAGGGGGTA AGGTTAACGG CTGGCTTGAT CGGCATTGAG CCTGAGGACG TAGTCATTGG TCAAAAAGTT AAAGTGGAGT TCACCACCTA CGACGGTGAT TTGACACTAC CAATGTTCAA ACCTGTCAGC GGATAA
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Protein sequence | MTQIRTLVGT EYDRIYAWDA INPAMVRQWC EVMGIDNPLY TDEQYALTTE FEGIVAPPSM LQTWCLAGFN DVCAPGSSEE NPYGVLKLLE AQGYPAVVAV NSELDFKRYL KMGEKLCYTT KLESISEEKT TGLGVGYFVT FIMTYFSTHN DGEEELVGTL LFRVFKFKPA ARAESTPEVK QDPKPAAKVY KRPKPGISDD NRFFWDGCNQ HELRIQHCTC CDKLQHPPAP ICMHCQSFEL DHKVVSGKGS IFSFVVMHYP EVPPFEHPNP IALVELEEGV RLTAGLIGIE PEDVVIGQKV KVEFTTYDGD LTLPMFKPVS G
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