Gene Spea_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2138 
Symbol 
ID5662531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2589931 
End bp2590896 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content45% 
IMG OID641236741 
Producthypothetical protein 
Protein accessionYP_001501993 
Protein GI157961959 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAA TACGCACTTT AGTAGGCACA GAGTACGACC GTATATACGC ATGGGATGCT 
ATCAACCCTG CGATGGTAAG GCAATGGTGC GAAGTCATGG GAATTGATAA CCCACTTTAT
ACCGATGAAC AATACGCATT AACAACAGAG TTTGAAGGCA TTGTTGCACC GCCTTCAATG
TTACAGACGT GGTGTTTAGC CGGGTTTAAC GATGTTTGTG CGCCGGGGTC TTCAGAAGAA
AACCCTTACG GCGTACTGAA ATTATTGGAG GCACAAGGCT ACCCAGCGGT TGTTGCGGTT
AATTCTGAAC TCGATTTTAA ACGATATTTA AAAATGGGCG AGAAGCTTTG TTACACCACA
AAATTAGAGT CAATTAGCGA AGAAAAAACC ACCGGCCTTG GGGTTGGATA CTTTGTCACT
TTTATCATGA CTTATTTTTC AACTCATAAC GATGGTGAAG AAGAATTGGT CGGCACTTTA
TTATTTAGAG TGTTTAAATT TAAACCAGCA GCTCGCGCAG AATCCACGCC TGAAGTAAAA
CAGGATCCAA AGCCTGCTGC CAAAGTGTAT AAGCGACCAA AGCCTGGGAT CAGCGATGAT
AATCGGTTCT TCTGGGATGG CTGTAATCAA CATGAACTTC GTATCCAGCA CTGTACTTGT
TGCGACAAAC TACAGCATCC ACCGGCACCG ATATGTATGC ATTGTCAGTC GTTCGAGCTA
GACCATAAAG TGGTTAGCGG TAAGGGGAGT ATCTTCTCTT TTGTGGTGAT GCATTATCCA
GAAGTCCCAC CATTTGAGCA CCCGAACCCA ATCGCTCTCG TCGAATTAGA AGAGGGGGTA
AGGTTAACGG CTGGCTTGAT CGGCATTGAG CCTGAGGACG TAGTCATTGG TCAAAAAGTT
AAAGTGGAGT TCACCACCTA CGACGGTGAT TTGACACTAC CAATGTTCAA ACCTGTCAGC
GGATAA
 
Protein sequence
MTQIRTLVGT EYDRIYAWDA INPAMVRQWC EVMGIDNPLY TDEQYALTTE FEGIVAPPSM 
LQTWCLAGFN DVCAPGSSEE NPYGVLKLLE AQGYPAVVAV NSELDFKRYL KMGEKLCYTT
KLESISEEKT TGLGVGYFVT FIMTYFSTHN DGEEELVGTL LFRVFKFKPA ARAESTPEVK
QDPKPAAKVY KRPKPGISDD NRFFWDGCNQ HELRIQHCTC CDKLQHPPAP ICMHCQSFEL
DHKVVSGKGS IFSFVVMHYP EVPPFEHPNP IALVELEEGV RLTAGLIGIE PEDVVIGQKV
KVEFTTYDGD LTLPMFKPVS G