| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2137 |
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| Symbol | |
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| ID | 5662530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2589023 |
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| End bp | 2589793 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236740 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001501992 |
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| Protein GI | 157961958 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.422468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATTG ATTACCAGAA TAAAGTGGTA TTGGTGACAG GTGGCACTAA AGGTATTGGA
GCAGGCATTG CTACGGAGTT TCTTGCAGCT GGAGCCAAAG TAATCGTTTG CGGTCGCAGT
GAGCCGCAAA CACTACCAAA TTCCGGTAAC AACACTGCGC AGTTTATTTA TGCGGACCTT
AAAAAACATG ACGATATTGA AACCTTGTTT AGCACGATTG CTAAACAATA TCCCCGTCTT
GATGTGGTGA TCAATAACGC CGGAGGAAGC CCTTTTGCGT TAGCCGACAA AGCCTCACCA
CGATTCCATG AGAGCATTCT TCGCCTAAAT CTTATTGCGC CTTTAAATGT CGCTCAACAA
GCGAACGCAC TAATGCAAGA ACAAGACTCG GGGGGGGCAA TTGTGTTTAT AGGCAGTATT
AGTGCGCTTA GAGCCTCTCC AGGGACCGCA GCCTATGGAG CAGCAAAAGC GGCGGTATTG
TCATTAGTAC AATCTCTTGC CGTTGAATGG GCACCAAAAG TTAAGGTAAT GGCCGTCAGC
CCGGGTCTAG TAAAAACCGA GCAATCGCAG CTTCATTATG GTGATGATGA GGGGATAGCT
GCGGTCGCTA AAACGATACC TGCAGGTCGA TTAGCCGATC CGGCTGACAT AGCTAAGGCT
TGTTTATTTC TCGCATCAGA AAACGGTTTT TATGCCAGTG GTTGCAACTT ATTACTTAAC
GGAGGCGGCG AAATGCCTGC GTTTTTAATG GCTTCTCAAA CTACTCAATA A
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| Protein sequence | MQIDYQNKVV LVTGGTKGIG AGIATEFLAA GAKVIVCGRS EPQTLPNSGN NTAQFIYADL
KKHDDIETLF STIAKQYPRL DVVINNAGGS PFALADKASP RFHESILRLN LIAPLNVAQQ
ANALMQEQDS GGAIVFIGSI SALRASPGTA AYGAAKAAVL SLVQSLAVEW APKVKVMAVS
PGLVKTEQSQ LHYGDDEGIA AVAKTIPAGR LADPADIAKA CLFLASENGF YASGCNLLLN
GGGEMPAFLM ASQTTQ
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