Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2128 |
Symbol | |
ID | 5662521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2578799 |
End bp | 2579803 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236731 |
Product | BNR repeat-containing glycosyl hydrolase |
Protein accession | YP_001501983 |
Protein GI | 157961949 |
COG category | [R] General function prediction only |
COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.437316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATAA TTTTTACTAT CTCTATTTCA TTGATTGTCG CCGCAGCCGG AATTATTGCT TTTTCGGAAA GAGAAACAGC ACCACTCGCT CACAGTAGCA TCCCCATTAC TAATATGAAC GTCACCAATG TTGTCGCTAC ATCTGCTGGA CTCGTCGCCA GTGGTGAGCT TGGGACGATA TTGTTATCTA AAGATGAGGG GAAGACATGG AATATGAGCA ATATCGATAC TCAGCGCTAT GCGTTGATCA CCCGGATGTT GTTTGACAGC CCTGATTTTG GGCTGGCTAT TGGCCATGAG GGCTGGATCT TAAAAACAAC TGACGGCGGA CTTAACTGGC GAGAAGTCGC ATTCGACCCA TCTGCCAGTG ACCCTTTATT CAGTATTGCC AAACTAAATA GTGGTCAATG GTTAACTGTA GGTGCGTTTG GCAATTCAAT GGTTTCCAAC GATAACGGTG AAAACTGGAA TAAAATTGCC GCTCCAGCGG CCACGGATTG GCATTTAAAT CGACTAATCT CTGACGACAA CAAACAAAAT TGGTTAATTG TTGGCGAGGC AGGCACGGTT CTGCGTTCAC AAAATGGCGC TGACAATTGG CAAGAATTAG CAGCATTTTA CGATGGGTCG CTATATGGAG GACTGCATTT AGGCGGTTCA AAATGGATTG TGTATGGGAT GAGAGGCAAT ATTTTTCGTA GTGAAGATAA TGGTGATAGC TGGCATAAAA TCAACTTCCC CTACCCCATT TCTTTGTTTA ATCACCTTTT ATTACCAAGT GGAGAGTTGC TCATCGCGGG CCAAGGAGGA ATTGTACTGG CGAGTGATGA TCAAGGAGAA ACGTTCAAAA TCATCCAAGG TGGTGGACGT TTATCAATTA CTGATCTGTT AATGCTACCT GATGGCCGAT TACTGTTTGC AACTGACTCT GGAGTGGTAC ATCCAGCCAC AAACAGCACA GGGTTAATAC CAAGCACACC TAATACTAAT AATTCAAATA GCTAG
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Protein sequence | MHIIFTISIS LIVAAAGIIA FSERETAPLA HSSIPITNMN VTNVVATSAG LVASGELGTI LLSKDEGKTW NMSNIDTQRY ALITRMLFDS PDFGLAIGHE GWILKTTDGG LNWREVAFDP SASDPLFSIA KLNSGQWLTV GAFGNSMVSN DNGENWNKIA APAATDWHLN RLISDDNKQN WLIVGEAGTV LRSQNGADNW QELAAFYDGS LYGGLHLGGS KWIVYGMRGN IFRSEDNGDS WHKINFPYPI SLFNHLLLPS GELLIAGQGG IVLASDDQGE TFKIIQGGGR LSITDLLMLP DGRLLFATDS GVVHPATNST GLIPSTPNTN NSNS
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