Gene Spea_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2123 
Symbol 
ID5662516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2568927 
End bp2570036 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content41% 
IMG OID641236726 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001501978 
Protein GI157961944 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.747407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAT CGAACAAGCA ATTGCCTAAT GATTATCAAA CGCAAAAATT AAAAGATCGC 
CAAGCGTTAA ATTACCCATT CGAACCACCA TTGTGTGATG CAAATGTTGT CTATGTGGCA
AAAGGCGTGC TTTGGGCGCG ACTCTCTATG CCGATGGGCC TAGATCATAT CAATGTTTAT
ATTTTGGAAG ATTTCGATGG CTGGTATCTA ATTGATACCG GTTTAAATAC TGAAGGTAAT
AAAGCTCTGT GGCTTTCGCT TGCAGCAAAT TACCTGAGCG CAAAACCGGT TAAAGGCGTT
ATCTGTACCC ATTTTCATTA TGACCACTCT GGCCTAACTA GCTGGTTAAC CGAATATTTT
AATGTGCCTT TGTATATGAC TCACGGTGAG TACTATATGT TGAGAGGGGT AGCTGCAACT
CATAATGCTA CCGGGAGTAA ACAGGATAAG CTGTTTTATA CTCACGCAGG CTTGTCTGCT
GAGTATGCCG CAAAGATTTT TGAAGCTTGT AAGAAAGATC CTTATATCAC GCATTACCCG
CCACGTTTTT CCCGCCTAAG AGAGGGGGAT ACTTTCAGAA TAGGACATCG AGAGTGGCAG
ATTTGGATTG GGGAAGGTCA TAGCCCAGAG CATGCTTGTT TATATAGTGA AGCCATAGAC
GAAGAACCTG CACTTTTAAT TGCAGGTGAC CAAGTTCTTC CCGAAATTAG TTCAAATATT
TTGGTTAGTA GCATTGAACC TGAAGCGAAC CCGTTAGCTA ACTGGTTTAG ATCGTTAAAG
CGACTCAAAG CATTAGATAG TGAAACTATG GTACTGCCAG CACATGGTCC CGTTTTTGTA
AACTTGCATA CTAGAGCTGA ACAACTGGAA CAGCATCACA TAAACCAACT GGATACACTG
CGTCAGTTAA GCATGAGTCA GGCAAGCTTT AGTGCCTTGG AAGCTGTAGA GGCGTTATTT
AAACGCCCTT TACAACCAAT AGAGAAGCTG ATGGCTCTTG GCGAAACACT GGCCCATTTA
AATTGGTTAA TAAACGTAGA AGAGTTAACA AAGACCCTTT GTAATAAAAG TAATAAATAT
TTATATAACA ATAAGCTAAG AATAGCTTAG
 
Protein sequence
MDESNKQLPN DYQTQKLKDR QALNYPFEPP LCDANVVYVA KGVLWARLSM PMGLDHINVY 
ILEDFDGWYL IDTGLNTEGN KALWLSLAAN YLSAKPVKGV ICTHFHYDHS GLTSWLTEYF
NVPLYMTHGE YYMLRGVAAT HNATGSKQDK LFYTHAGLSA EYAAKIFEAC KKDPYITHYP
PRFSRLREGD TFRIGHREWQ IWIGEGHSPE HACLYSEAID EEPALLIAGD QVLPEISSNI
LVSSIEPEAN PLANWFRSLK RLKALDSETM VLPAHGPVFV NLHTRAEQLE QHHINQLDTL
RQLSMSQASF SALEAVEALF KRPLQPIEKL MALGETLAHL NWLINVEELT KTLCNKSNKY
LYNNKLRIA