Gene Spea_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2117 
Symbol 
ID5662510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2561614 
End bp2562537 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content45% 
IMG OID641236720 
Productacetaldehyde dehydrogenase 
Protein accessionYP_001501972 
Protein GI157961938 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4569] Acetaldehyde dehydrogenase (acetylating) 
TIGRFAM ID[TIGR03215] acetaldehyde dehydrogenase (acetylating) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTA AAATAAAATG TGCGCTGATT GGCTCTGGCA ATATTGGCAC CGACCTACTG 
TACAAATTAC TGCGAAGTGA TGTGCTTGAG CCGGTGTGGA TGGTAGGAAT AGACCCAGAC
TCTGACGGTT TAGCTAAAGC TAAAGCTGCT GGGCTAAAAG TAACCGCTGA TGGTATAGAT
GGTTTACTTC CCTTTGTTGA AGCCGATGAG ATAAAAATTG CTTTCGATGC GACATCAGCT
TATGTGCATG CAGAAAATTC AAGAAAACTA AATGAATTAG GGGTGGTGAT GATTGATTTA
ACCCCAGCTG CAATTGGTCC CTTTTGCGTA CCGCCAGTCA ACCTTGAGCA ACTTGATGAA
AATATTAACA ACATTAATAT GGTCACCTGT GGTGGACAAG CAACTATTCC TATGGTTGCA
GCGGTGTCAC AAGTACAGGC TGTAGAGTAC GGTGAAATTG TTGCCACGGT ATCTTCGCGC
TCCGTGGGTC CGGGAACGAG GCAAAACATT GATGAATTTA CCCGTACCAC AGCTGGTGCA
GTTGAACAAA TTGGCGGTGC AGAAAAAGGC AAAGCTATTA TTGTCATTAA CCCTGCTGAG
CCACCGTTAC TGATGCGCGA TACCATTCAT TGTCTAACAA AAGATCAACC CGATGAACAG
GCGATTACTG CATCTGTTCA TAAGATGATT GAACAAGTTC AACAATATGT ACCCGGTTAC
ACCCTTAAAA ACGGTCCGGT GTTTGATGGT CGTAAGGTCA CTATCTTTTT AGAAGTCGAA
GGGCTGGGCG ATTACTTACC AAAGTATGCC GGTAACCTAG ACATAATGAC CGCTGCAGCA
GCCAGAACAG CAGAAATGCT AGCGTCCAAA ATGCTCAATG TTAAAACCCA TCTTAACGTT
ACCAAAGAAG CGGCGCTAGC CTAG
 
Protein sequence
MTSKIKCALI GSGNIGTDLL YKLLRSDVLE PVWMVGIDPD SDGLAKAKAA GLKVTADGID 
GLLPFVEADE IKIAFDATSA YVHAENSRKL NELGVVMIDL TPAAIGPFCV PPVNLEQLDE
NINNINMVTC GGQATIPMVA AVSQVQAVEY GEIVATVSSR SVGPGTRQNI DEFTRTTAGA
VEQIGGAEKG KAIIVINPAE PPLLMRDTIH CLTKDQPDEQ AITASVHKMI EQVQQYVPGY
TLKNGPVFDG RKVTIFLEVE GLGDYLPKYA GNLDIMTAAA ARTAEMLASK MLNVKTHLNV
TKEAALA