| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2112 |
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| Symbol | |
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| ID | 5662505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2555664 |
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| End bp | 2556566 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236714 |
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| Product | putative DNA-binding transcriptional regulator |
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| Protein accession | YP_001501967 |
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| Protein GI | 157961933 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000406165 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTTCTG AACAGTCTCT TCAGCTCATC GATATGGTTG CTCGCGTTGG CAGTTTTACC
GCCGCAGCCA ATAAATTACA TAAAGTCCCT TCAGCTGTGA GTTATGCAGT TAAACAAATT
GAAGAAGAAC TCGGCGTGGT ACTTTTTGTT CGTCATCACA GGAGCGTTAG CTTAACTGCC
GCCGGTGAAC ACTTCGTTAA ACAGTCACGT TCACTATTAT CAGACATTGA CACAATGCGC
GCCGATACCA TACGCGTAGC CAATGGCTGG CAGCCTACCT TGTCTATAGC GCTCGATAAC
ATCGTACGCG CAGATAAAAT CAGTAATTTA ATCGCCGACT TTTATCGAAC CTTTGATAAT
GTCGAACTGA TTATACGCAT CGAAGTATTC AATGGTGTGT GGGAATCGAT TGCTACCGGT
CGTAGCGACA TCGCAATAGG CGCAACCACC GCCATACCTG TTGGTGGTGA TTACCATTTT
AGAGACATGG GCGAAATCGA GTGGTGCTTT CTTGTCGGTA AAAACCACCC ACTTGCAGAA
ATTGATCGGC CGCTAACAGA TGATGAGTTA AGGCAATACC CTTCTATATG TTTAGAAGAT
ACTTCTCGTG AGATCCCTAA ACGTATGACC TGGCTGCTAG AAAATCAACG TCGATTAGTT
GTGCCTGACT GGATCCGCGC TATCAACTGT TTTCGTGAAG GCTTAGGTGT TGGATATATG
CCGGCCCATT TTGCTTTCCC GTTTATTAAG ACCGGCGCAT TAATAGAAAA GCAGCTTGAA
AGACCGAATA AAACCAGTCC TTGCTGTTTA GCCTGGAACG CGACGAATAA GTCCCCAGCC
ATGGCTTGGG TACTCGATTA TTTGGGCGAT AGTGAAAAGC TACATAAAGA CTGGTTAGAT
TAA
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| Protein sequence | MLSEQSLQLI DMVARVGSFT AAANKLHKVP SAVSYAVKQI EEELGVVLFV RHHRSVSLTA
AGEHFVKQSR SLLSDIDTMR ADTIRVANGW QPTLSIALDN IVRADKISNL IADFYRTFDN
VELIIRIEVF NGVWESIATG RSDIAIGATT AIPVGGDYHF RDMGEIEWCF LVGKNHPLAE
IDRPLTDDEL RQYPSICLED TSREIPKRMT WLLENQRRLV VPDWIRAINC FREGLGVGYM
PAHFAFPFIK TGALIEKQLE RPNKTSPCCL AWNATNKSPA MAWVLDYLGD SEKLHKDWLD
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