Gene Spea_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2111 
Symbol 
ID5662504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2554830 
End bp2555492 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content43% 
IMG OID641236713 
Producthypothetical protein 
Protein accessionYP_001501966 
Protein GI157961932 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000565103 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA TGACACAACA AACCGCGTAT AGCAGTACTT CAGTTGAAGT AAACAAACTG 
CTTAAGAATA CGTATATGCT GCTTTCTATG ACCTTAGCGT TTTCTGCAGT GTGCGCAGGT 
TTGGCGATGG CATTAGCAAT TAGCCCTATG ATGTCTCTAG GCTTATCTAT CGGTAGTTTA 
GTGCTTTTGT TTGTGACGCT AAGAAAAGCT GACTCGAGTG CTGGTCTATT TTGGGTATTC 
GCGTTCACGG GTATGCAAGG TGCGTCGCTG GGCTACATCC TTAACCATTA TGCAGGTATG 
GCTAATGGTC CACAGCTGAT CATGCAGGCA CTGGGTTTAA CCTCGGTAAT ATTCATCACT 
CTCTCAGGTT ATGCGGTAAC GACTAAGAAA GATTTCTCGT TTATGCGCGG CTTCCTTATT 
GCTGGCCTAG TTATTATGGT TGTTGGCCTC CTAGTTAACC TTTTCCTTGG TAACGGCATG 
GTGTTTATGG CACTCAACGC CGGTATCGCA TTGTTAATGA CAGGCTTTAT TCTTTACGAT 
ACAAGCAAAA TCGTTAATGG CGGCGAAACT AACTATATTC GCGCAACCAT TTCTTTATAC 
TTAGATTTCT TAAATCTTTT CATCGCCCTA TTACATTTAA TGGGTATTGG CGGCGATGAC 
TAA
 
Protein sequence
MKDMTQQTAY SSTSVEVNKL LKNTYMLLSM TLAFSAVCAG LAMALAISPM MSLGLSIGSL 
VLLFVTLRKA DSSAGLFWVF AFTGMQGASL GYILNHYAGM ANGPQLIMQA LGLTSVIFIT 
LSGYAVTTKK DFSFMRGFLI AGLVIMVVGL LVNLFLGNGM VFMALNAGIA LLMTGFILYD 
TSKIVNGGET NYIRATISLY LDFLNLFIAL LHLMGIGGDD