| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2106 |
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| Symbol | |
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| ID | 5662499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2548825 |
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| End bp | 2550261 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236701 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001501961 |
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| Protein GI | 157961927 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0146546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTG ATAAACACCT ACAAAGTTGG CAAGAACGAT TCGAAATGGC TGAGGCTATG
CAGCCATTAC TTGGTAAGTT ATACCGTAAC CAAGGTGTAG AAGTCGTCGT CTATGGCAAA
CCTCTACTGA ATGCCTCTAC AATCGAAATC ATTAAATCGC ACCGTTTAGT GCGTCGCCAC
GTTGGTGAAA AACTAAGACT ACGTGAAAGC TTTCCATTTG TTGAGGCTTT AAGCAAGTTA
GCGGTAAAAC AGTGCAAAGT CGATATCGGT AAATTAGCTG TTAATTACTG GCGCGAATAC
CCTGATGCGA GTCAAATTGA GGCTTATATG AGCCGTGAAC TTGCAGATGC TATCACTAAC
GAAGACGACG AAGCCGCTAG AGATGTTGTC CTATACGGTT TTGGTCGTAT TGGTCGTCTA
TTAGCACGTT TGCTGATTGA AAGAACAGGT GTTAGTAACA AGCTTAGACT ACGTGCAATC
GTACTGCGCG GTGGCCGTAA AGGTGATTTA GAAAAGCGTG CAAGCTTACT ACGTCGTGAC
TCGGTACATG GTCCATTCAA CGGTTCAGTT GAAGTCGACG AAGAAAACAA CGCAATTATC
GCTAACGGTA CCTACATTCA GGTTATCTAC GCGAACTCGC CAGACGAAGT GGATTACACT
AAATTCGGTA TTTCAAATGC GCTTGTAGTT GATAACACCG GTATTTGGAA AGATGAAGCG
GGCCTTGGTT TACACCTTAA ATCACCAGGT GCAAGCAAAG TATTGCTTAC TGCTCCAGCA
AAAGGTGCAA TTAAGAACGT AGTTTATGGT GTAAACGAGC AAGACATCCT TGACGAAGAT
ACGATTGTAT CAGCTGCAAG CTGTACCACT AACGCGATTA CACCAGTACT TAAAGCGGTT
AATGACAAGT ACGGTATCGA AAATGGTCAC GTGGAAACAA TCCACTCATA TACTAACGAC
CAAAACCTAA TCGATAACTA TCACAGTGCA GATCGCCGTG GACGTAGTGC TCCATTAAAC
ATGGTAATTA CTGAAACAGG CGCAGCTAAA GCAGTATCTA AGGCGTTACC TGTGCTAGAA
GGTAAGCTAA CAGGCAACGC GATTCGTGTG CCTACACCAA ACGTTTCTAT GGCGATTATT
AGCTTAAACC TGAACGGTGA GACTAATAAA GAAGAGCTTA ACGAATACAT AAAAGATATG
GCGCTGCAGT CTGATTTGCA AAACCAGATT GATTACACTG ATTCGACAGA AATCGTTTCG
AGCGACCTTG TGGGTTCACG TTACGCAGGT GTTGTTGATT CGCAAGCGAC CATTGCTGAA
GGTAAGCGTG CAATCCTTTA CGTATGGTAT GACAATGAAT TTGGCTATAG CTGCCAGGTT
GTTGGTGTTA TGCAAAAGAT GCTTGGCCTT AACTACCAGT CATTACCACA TGGCTAA
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| Protein sequence | MSADKHLQSW QERFEMAEAM QPLLGKLYRN QGVEVVVYGK PLLNASTIEI IKSHRLVRRH
VGEKLRLRES FPFVEALSKL AVKQCKVDIG KLAVNYWREY PDASQIEAYM SRELADAITN
EDDEAARDVV LYGFGRIGRL LARLLIERTG VSNKLRLRAI VLRGGRKGDL EKRASLLRRD
SVHGPFNGSV EVDEENNAII ANGTYIQVIY ANSPDEVDYT KFGISNALVV DNTGIWKDEA
GLGLHLKSPG ASKVLLTAPA KGAIKNVVYG VNEQDILDED TIVSAASCTT NAITPVLKAV
NDKYGIENGH VETIHSYTND QNLIDNYHSA DRRGRSAPLN MVITETGAAK AVSKALPVLE
GKLTGNAIRV PTPNVSMAII SLNLNGETNK EELNEYIKDM ALQSDLQNQI DYTDSTEIVS
SDLVGSRYAG VVDSQATIAE GKRAILYVWY DNEFGYSCQV VGVMQKMLGL NYQSLPHG
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