| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2100 |
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| Symbol | |
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| ID | 5662493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2542979 |
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| End bp | 2543674 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236695 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001501955 |
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| Protein GI | 157961921 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.115059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAAAC ACGCATTGAT TACGGGTGGT AATCGTGGAA TTGGACGAGC GTTCGTAGAA
CACTATTTAA AAGCTGGTTG GAATGTTACA GCTTGTTGTC GAGATCCTAA AAGGGCGGTT
GAACTGTCGG TATTAAAATC TGATTATGAG CAACTAAAAG TTATGTCACT GGACGTCAGC
CTTTCAGAGT CAATTGCTAT CTTAACCAAA GAATTGGCCG GAACTCCGAT CGATTTACTA
ATTAATAATG CAGGGTATTA TGGTCCTAAG GGAGTCGAGT TTGGAAGCTG TGATGCTAAG
GAGTGGGGTA AAGTCATTGA GGTTAACACT ATTGCACCAT TGATGCTTAC AGAAGCCTTG
TATCAAAACC TAAAATTAGT GGGCAACCCT GTAGTCGCCT TTATTTCCTC TAAAGTCGGC
AGTATGGAAG ATAATACCAG TGGTGGTGGC TATTACTATC GCTCATCCAA AGCGGCGCTT
AATTCTGTGG TAAAGAGTTT ATCTATTGAC TTGAAAGATG ACGGAATAAA ATGTGTTGCT
CTGCATCCAG GTTGGGTACT GACAGCAATG GGAGGCCCTA AAGCACTTAT CGATACCGAC
ATGTCGGTTA AGGGCATGAT GGCAGTAATA GGTAAGTTAA CATGGGAACA AAGTGGTGAT
TTTTACGACT ACCAAGGAAA ACCAATACCT TGGTAG
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| Protein sequence | MTKHALITGG NRGIGRAFVE HYLKAGWNVT ACCRDPKRAV ELSVLKSDYE QLKVMSLDVS
LSESIAILTK ELAGTPIDLL INNAGYYGPK GVEFGSCDAK EWGKVIEVNT IAPLMLTEAL
YQNLKLVGNP VVAFISSKVG SMEDNTSGGG YYYRSSKAAL NSVVKSLSID LKDDGIKCVA
LHPGWVLTAM GGPKALIDTD MSVKGMMAVI GKLTWEQSGD FYDYQGKPIP W
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