| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2094 |
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| Symbol | |
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| ID | 5662487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2535348 |
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| End bp | 2536550 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236689 |
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| Product | integrase family protein |
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| Protein accession | YP_001501949 |
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| Protein GI | 157961915 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000349759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGATT TAACGTCACT TTTACAGATT AAGGCCAAAG ATCTAAAGAT GAATTCTGAG
CAAAACTTTC CTGAAATAGA GGGCTTTTCA CAAATCGAAG ACTCAGATCT GATAGAGAAT
GCTCCTCAAG AGGTCGCTAT TGTTGATGGC GAGAGTGCTC TGACTCGATT TAATTCTGGC
TTAGCAGAGA GTCGAACTTC TCAGTTTGAT CACAATGAGA AGTTCTTCAA AGAGCAGCAA
CTTCCTATCT CAATCTTAGA TGATTACAAA AGTGCGGCTG GTGAAACCCA ATATGAGATC
TCTGCTAACA CTCGCCGAGT CTATCGTTCC AGTTTTACCA TTTTCAAGAA TTACTGCGAT
CAACATAATC TAAGTCCCCT GCCCGCAGAC CCTCGCAGTG TGATTTCTTT TATCGGTCAT
CAAAAAGAGC TCTACCAGGA AAAGAATGGC CACCAGCTAT CAAAACAAAC AATCAACACC
CGTTTGGCGG CAATCCGTTT CTTTCATATT CAAGCCGCAT TGCACTCACC GACTGAACAT
CCACTGGTGA TCCGAGTGAT GCGCGGCCTG ATGCGTAACC AATATCGACA TGTTTCTGAC
TATGATCAGC AACCGATCAC CTATGACGAA CTGGAGATGT TATTGGCCGT AATTGATCAA
CAACCAAAAG AGCTAACTCG TTTACGAGAT AAGGCTATTT TACAGCTTGG CCTGCAAGGT
GGATTTAGAC GTTCAGAATT AGCAGAAGTC AGAATTGAGC ATATTAGTTT TTTAAGAGAG
AAGTTAAAGG TTCGGGTACC CTATTCAAAG AGTAACCAGC AGGGACAAAG GGAGTGGAAA
GATCTCCCTA AACAAGAACT ATTTTCTGCT TATGATGCCG TTCAACAATG GCTCGACGCC
ACCAAGATTA AACAGGGACA CCTGTTTAGA TCACTTAGCC GTGATGGCAA CTCAGTTAGA
GAGTATCAGA TCACTCAAGA AAAAATAGGT AAGGGTTTTT TAAAGGGGGA TGACATTTAT
CAGATGATAA AAAAATACTG TGATAAGGCG GGACTCAATT CTCGATTCTA TGGAGCCCAT
AGTTTACGAA GCGGTTGTGT TACCCAGCTC CATGAAAATG ATAAAGACCA TCTCTACATC
ATGGCAAGAA CTGGGCATAC AGATCCAAGA TCATTGCGAC ACTACTTAAA ACCTAAAGAT
TAA
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| Protein sequence | MLDLTSLLQI KAKDLKMNSE QNFPEIEGFS QIEDSDLIEN APQEVAIVDG ESALTRFNSG
LAESRTSQFD HNEKFFKEQQ LPISILDDYK SAAGETQYEI SANTRRVYRS SFTIFKNYCD
QHNLSPLPAD PRSVISFIGH QKELYQEKNG HQLSKQTINT RLAAIRFFHI QAALHSPTEH
PLVIRVMRGL MRNQYRHVSD YDQQPITYDE LEMLLAVIDQ QPKELTRLRD KAILQLGLQG
GFRRSELAEV RIEHISFLRE KLKVRVPYSK SNQQGQREWK DLPKQELFSA YDAVQQWLDA
TKIKQGHLFR SLSRDGNSVR EYQITQEKIG KGFLKGDDIY QMIKKYCDKA GLNSRFYGAH
SLRSGCVTQL HENDKDHLYI MARTGHTDPR SLRHYLKPKD
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