Gene Spea_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2089 
Symbol 
ID5662482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2527932 
End bp2529722 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content44% 
IMG OID641236684 
Producthistidine kinase 
Protein accessionYP_001501944 
Protein GI157961910 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATAT CCAAACTACG CCCTTTCTTA GCACTGAGTT GCCTTACTCT CTCTTGTTTC 
CAGGCATGCT ATAGCTTTGC TCAAGACTCA GTCCCAATTC GTGTCGGAGT GTTGGCATTT 
ACTCATCCAG AGAACGTAGA AAAGCGCTGG CAACCGACAA TAGATAGAAT CGCAGCAGAC 
TTAAACACGC CTTTTGAATT GGTCGCATTG ACACCGAGCG AATTAGACGC CGATGTTGCA 
CAGGGAAAAT TAGATTTTTT AATCACTAAT GCGTTAACCG GTGTTAGCTA TAAAAAAGAC 
TTTGGGACAA GTAGTCTTCT CACACTGGTT CCTCGAGGTA ATAAGCACCC TACGCAATCG 
GTAGGCTCAG CATTGATCAT GCGGGCGCAC GAGCAAGTTG ATAATCTAGA TGATTTAAAG 
ACCCTCAGAG CAATTTCAAC TGATAAACAA GCATTCGGTG GCTTTCAAAT TTTTGCCGGC 
GAAATGGCCC ATAACGGTTT AAATCCCTTC AATGATTTTA AACAGTTGAA TTTTGTTGGG 
TTTCCCCAGC AAAAGTTATT GTCACTGATA GTTGACGGTA AAGCTGATAT AGCAATTCTG 
CCCACTTGTG TGCTTGAGAA TGCGATATTA AAAGGCGAGA TTGCGGCTAA GGCCCTGCAA 
GTCGTGCTCG CTAAAGACGC ACCTAGCTTT CAATGTCAAA CCTCAAGCGA GCTATATCCC 
TATTACTCTT TTTCCAAACT TGGCAAGACA GATCATCGCT TAGCAACTGA AGTCGTACGC 
TCGTTACTTT CAATAAAACC CATAGATCAT GCAGCAACAC AAGGCCGCTA TGACTCGTGG 
TCTGCCACGG TAAACGATAG CCATGTTTTT AAACTGCTGA AACAGTTACA GCAATGGCCA 
TTTGTCACCA ATTGGACCTC TATTTTTAAG AGTGCACTGC CCTGGGCTGT TGTCGCCGCA 
ATAATTTTGT TATTCGGTTA TATTCATCAC CTTAGAGTAA AGCGACTTGT AGTGCTGCGC 
ACACGAGATC TTAAGGCAGA AGTTGAACTA CACACTCAAA CACAAAAAGC CCTACTAGAG 
CAAACAAAGC AGTTTTATAA GGCTCAACGC GTCTTGTTGA CTGGTGAAAT GGCGTCAGGC 
ATCGCCCATG AACTTAATCA ACCCTTAGCA GGGATCCGTT ATCTCACTCA GGGTTGTATT 
TATCGCCTGT CTGATGATCA AGTCGAGCTT AAAGAGGCCA TGAATAAAGC CATTCAGCAG 
GTCGATAGGG CTCAATCGAC CATTAAGCGC TTTAGGCACT TCTGCCAACA ACCTAGTGTG 
ATGACCGAGT GTTGTTTAAA TCAGGTTTTA GAAGATACGC TCAGCCTAAT GGCCGCCGAG 
TTTTCCCGAA TACAGCTGAC TCCAGACTTA AATAGCCTAG TGGTTAGCCT TAAAGCCGAT 
CCGAGTCTTT TACAACAAGT ATTCGTTAAT ATTATTCGTA ATGCACTCGA TGCCATGGCT 
CAAACTAAGG AGCCTTGTCT ATCTATAACG CTCTCTAAGC AAGCTGAGCA GGCTTCTATT 
GTATTTAAAG ATAATGGCAC TGGTTTAAGC GAAACAGCCC TAGAACGGTT ATTCTTCCCT 
TTTGAAACAT CAAAAGAGAA CGGCTTAGGT CTTGGGATGA TTATCTGTAA AAGGATCATC 
GAAGAACATG ACGGCGAGAT CATCGCAGCT AACAATAACC TTGAAGGCTC GGCCGCTCCA 
GGTTTGACCA TAACAATAAC CCTACCTATT AAGGGGCCTC AAATTGTGTA A
 
Protein sequence
MMISKLRPFL ALSCLTLSCF QACYSFAQDS VPIRVGVLAF THPENVEKRW QPTIDRIAAD 
LNTPFELVAL TPSELDADVA QGKLDFLITN ALTGVSYKKD FGTSSLLTLV PRGNKHPTQS 
VGSALIMRAH EQVDNLDDLK TLRAISTDKQ AFGGFQIFAG EMAHNGLNPF NDFKQLNFVG 
FPQQKLLSLI VDGKADIAIL PTCVLENAIL KGEIAAKALQ VVLAKDAPSF QCQTSSELYP 
YYSFSKLGKT DHRLATEVVR SLLSIKPIDH AATQGRYDSW SATVNDSHVF KLLKQLQQWP 
FVTNWTSIFK SALPWAVVAA IILLFGYIHH LRVKRLVVLR TRDLKAEVEL HTQTQKALLE 
QTKQFYKAQR VLLTGEMASG IAHELNQPLA GIRYLTQGCI YRLSDDQVEL KEAMNKAIQQ 
VDRAQSTIKR FRHFCQQPSV MTECCLNQVL EDTLSLMAAE FSRIQLTPDL NSLVVSLKAD 
PSLLQQVFVN IIRNALDAMA QTKEPCLSIT LSKQAEQASI VFKDNGTGLS ETALERLFFP 
FETSKENGLG LGMIICKRII EEHDGEIIAA NNNLEGSAAP GLTITITLPI KGPQIV