Gene Spea_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2088 
Symbol 
ID5662481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2527340 
End bp2527939 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content45% 
IMG OID641236683 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001501943 
Protein GI157961909 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGTAACT TATATCTAGT CGACGACGAT CAAGCGGTAT TAGACTCTTT GACTTGGATG 
TTAAATGGGC TTGGCTTCCA ACCCCAAGGA TTCCTGTCCG CCGACAGTTT CTTAAATCAA 
GTCAATCTTC ACAATGAAGG CATTGCAGTC TTAGATGTAC AGATGCCAGG TATGGATGGT 
AGCGCGCTAC TGTCACTCCT CACTAAGGCT CAAAGTCCTA TCGCTGTGAT CATGTTGAGT 
GGCCATGGCA ATATTGCTAT GGCGGTACAA GCGATTCAAA GAGGGGCTTT AGACTTTCTT 
GAAAAGCCCG TAGATGGTGA CAAGCTTGTC GTGCTACTTG AGCAGGCCAA AACCCAAACA 
AAGCTTAACA TGCAGCGTAA ACTAGCACGT GAAGCGCTAA GCGATAAGCT TGAAGCACTG 
ACTCCTAGAG AGCATGAAGT GATGGAAAAG GTACTAGAGG GTAAGCTCAA TAAAGTGATT 
GCTGCCGAGC TTAATATTGC ACAGCGAACT CTAGAATTAC ACCGTCAGAA AGTGATGCAA 
AAAATGCAGG TCAGTAACGT TGCCGAATTG GCTTTTTTGA TGGGTAAGAG TACCGAATAG
 
Protein sequence
MCNLYLVDDD QAVLDSLTWM LNGLGFQPQG FLSADSFLNQ VNLHNEGIAV LDVQMPGMDG 
SALLSLLTKA QSPIAVIMLS GHGNIAMAVQ AIQRGALDFL EKPVDGDKLV VLLEQAKTQT 
KLNMQRKLAR EALSDKLEAL TPREHEVMEK VLEGKLNKVI AAELNIAQRT LELHRQKVMQ 
KMQVSNVAEL AFLMGKSTE