| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2078 |
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| Symbol | |
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| ID | 5662471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2517614 |
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| End bp | 2518420 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236673 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001501933 |
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| Protein GI | 157961899 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.237078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGCT ATCAAGGAAA GAATGTTGTC GTTGTAGGTG GTACTAGCGG GATTAATCTT
GCTATTGCCG TTCACTTCTC TCAAGCCGGA GCGAATGTTG CTGTGGCGAG CCGCTCCGTC
GAAAAAGTAG ATGCCGCTGT AGAGTTATTA AAACAAGCAA ACCCTAATGG AGAACACTTA
GGTGTTTGCT TTGATGTCAG GGATCTTGAG GCCTTATCAA AGGGCTTTGC TACTATTAGT
GATGCCTTCT CAACTATCGA TGTTTTAGTG AGTGGCGCCG CCGGTAATTT TCCGTCAACT
GCTGAAAAGC TTTCCGAAAA TGGTTTTAAG TCGGTAATGG ATATCGATCT CTTAGGCAGT
TTTCAGGTGC TTAAGCAGGC TTATCCATTA ATGAGTGACA CTGGTGGAGC GATTATACAG
ATCTCTGCAC CACAGGCGTT TGTACCTATG CCTATGCAAG TTCATGTGTG CGCTGCTAAA
GCGGGCGTTG ATATGTTAAC TAAAACATTA GCAATAGAAT GGGGACGCAA AGGGATCAGG
ATAAATTCAA TTGTCCCAGG TCCTATAGCG GGAACCGAAG GCTTTAATCG GTTAGCCCCA
TCAGAAGAGC TGCAGGCTCA CGTTGCGCAA GGCGTTCCAT TAAAACGTAA TGGGCGTTGT
GAAGACATTG CCAACGCGGC CCTATTTCTC GCTTCAGATA TGGCCTCGTA TATCACAGGC
ACTGTGTTGC CAGTTGATGG TGGTTGGTCA TTAGGTGGGG CTGGTTCTGC AATCGCCGAG
ATCGGCCAAT TAGCTAGACG CAACTAA
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| Protein sequence | MFSYQGKNVV VVGGTSGINL AIAVHFSQAG ANVAVASRSV EKVDAAVELL KQANPNGEHL
GVCFDVRDLE ALSKGFATIS DAFSTIDVLV SGAAGNFPST AEKLSENGFK SVMDIDLLGS
FQVLKQAYPL MSDTGGAIIQ ISAPQAFVPM PMQVHVCAAK AGVDMLTKTL AIEWGRKGIR
INSIVPGPIA GTEGFNRLAP SEELQAHVAQ GVPLKRNGRC EDIANAALFL ASDMASYITG
TVLPVDGGWS LGGAGSAIAE IGQLARRN
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