| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2077 |
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| Symbol | |
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| ID | 5662470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2516843 |
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| End bp | 2517538 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236672 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001501932 |
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| Protein GI | 157961898 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0111408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGACA AGCCTATTTT AGTTGCCCTA GACTATGATA ATAAAAATGA TGCTTTGCAG
CTTATTGATC AATTAGATCC AGAGATGTGT CGATTAAAAG TCGGCAAAGA GATGTTCACT
TTGTTTGGGC CGCAATTAGT CACAGATATC CACAACCGCG GATTTGAATT GTTCCTTGAT
CTTAAATTCC ACGATATCCC GAATACGGTA GCTAAAGCGG TTGCAGCAGC TGCAGAGCTG
GGCGTTTGGA TGACAAATAT CCATGCAACT GGTGGTCTGG CAATGATGGA AGCGGCTAAG
CGTGCTCTTG AGCCATACGG CGATAAAGCT CCGTTACTGA TCGCAGTAAC AGTGCTGACA
TCTATGAGCG ACGACGAACT TAAGCTACTG GGTATTAATG TACCGGCATC TGAACATGTA
TTGCGTTTAG CTGCCCTGAC TAAACAAGCA GGCCTAGATG GTGTTGTTTG TTCAGCTCAG
GAATCTGCAC TTTTGAAAGC CAAATTTGGT CAAGATTTTA AGCTGATTAC GCCAGGTATA
CGTCCTGAAG GCAGTGACAA AGGTGATCAG CACCGCGTAA TGACGCCATC ACAAGCGTTA
ACTGCAGGTT CAGATTACTT GGTGATTGGC CGCCCAATTA CCAAAGCGGC TGACCCATTA
AAAGCATTAC AGGCGATACA CCAAACGATT GCTTAA
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| Protein sequence | MTDKPILVAL DYDNKNDALQ LIDQLDPEMC RLKVGKEMFT LFGPQLVTDI HNRGFELFLD
LKFHDIPNTV AKAVAAAAEL GVWMTNIHAT GGLAMMEAAK RALEPYGDKA PLLIAVTVLT
SMSDDELKLL GINVPASEHV LRLAALTKQA GLDGVVCSAQ ESALLKAKFG QDFKLITPGI
RPEGSDKGDQ HRVMTPSQAL TAGSDYLVIG RPITKAADPL KALQAIHQTI A
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