Gene Spea_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2076 
Symbol 
ID5662469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2515616 
End bp2516776 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content44% 
IMG OID641236671 
Producttetratricopeptide repeat protein 
Protein accessionYP_001501931 
Protein GI157961897 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000100726 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAA TCCTGTTTCT GCTTCTTCCA ATAGCAGCCG GTTACGGTTG GTATATGGGA 
CGCAGAAGTG TCAGACAAAA GCAGACAAAT CAGCGAAAAC AGCTGAGCCG AGACTATTTT 
ACTGGGCTTA ACTTTCTGTT GTCTAATGAG TCAGATAAAG CCGTCGATCT GTTTATCAGT 
ATGCTTGATG TCGATGACGA TACTATCGAT ACCCATCTTT CTCTAGGCTC ACTATTTCGT 
AAGCGCGGTG AAGTAGACCG CTCGATCCGC ATTCATCAAA ACTTAATTGC TAGACCGAGT 
CTAACCACAG AGCAAAGAGA CATTGCTATG ATGGAGCTTG GCAAAGATTA TCTCGCTGCT 
GGTTTTTATG ATCGTGCAGA AGAGATCTTT ATCAATTTGG TCAATCAAGA TGACCACAGC 
GAAGAATCTG AGACTCAACT GATTGCGATA TACCAAGTGA CTAAAGATTG GCAGAAAGCC 
ATCGATATTA TCAAAAAGCT CAAGCGTAAG CGTCAGCATG AACTTAAACA CGACAGCGCC 
CATTTTTATT GTGAGTTGGC AAACGAAGCC GAAGATGATG CGCTTAAGCT TAAGAATTTA 
CAGTTAGCGA TTAAACAAGA TAGCCAGTGT GCTCGTGCCT TATTAACGCT CGCTGAGCAA 
TATTTGAAAC AAGAAGAATT CAAGTCTTGT AAACAAGCCA TTGAAAAACT GCTAACAACG 
GATATCGACC TAGTACCGGA TGCCTTGGCC ATTGCTAAAG AAGCATACTT GCTGACAAAC 
GACAGTACGG GTTATCAAGA GCTACTTAGA GAGGCGATTG AAAAGGGGGC TGGTGCAAGC 
GTCACCATTA CCCTTGCTCA GCACATGATT GAGCAAGGCC ACCCGAAGGA TGCAGAGAAG 
TTAATTATGG AAGGTCTAAT AAGACACCCA ACCATGAAGA GCTTTCAGCA CCTAATGAAG 
ATGCAATTAC TGCAAGCGGA AGAAGGGCAG GCAAAGAAGA GCTTATCGAT GCTAGAGCAG 
CTTGTAGAAC AACAAATTAA ATATCGACCA GGGTATCGCT GCCGAGAATG TGGCTTCCCA 
TCACACAGAT TATATTGGCA TTGCCCCTCC TGTAAGCATT GGGGCAGCAT TAAAAGGATC 
AGAGGTCTAG ACGGAGAGTA A
 
Protein sequence
MLEILFLLLP IAAGYGWYMG RRSVRQKQTN QRKQLSRDYF TGLNFLLSNE SDKAVDLFIS 
MLDVDDDTID THLSLGSLFR KRGEVDRSIR IHQNLIARPS LTTEQRDIAM MELGKDYLAA 
GFYDRAEEIF INLVNQDDHS EESETQLIAI YQVTKDWQKA IDIIKKLKRK RQHELKHDSA 
HFYCELANEA EDDALKLKNL QLAIKQDSQC ARALLTLAEQ YLKQEEFKSC KQAIEKLLTT 
DIDLVPDALA IAKEAYLLTN DSTGYQELLR EAIEKGAGAS VTITLAQHMI EQGHPKDAEK 
LIMEGLIRHP TMKSFQHLMK MQLLQAEEGQ AKKSLSMLEQ LVEQQIKYRP GYRCRECGFP 
SHRLYWHCPS CKHWGSIKRI RGLDGE