Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2071 |
Symbol | |
ID | 5662464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2510909 |
End bp | 2512189 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236666 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001501926 |
Protein GI | 157961892 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00058789 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAT TACGATTAGA GCCGATCAAA AAAGTGTCAG GTACCATTAA TATTCCTGGT TCAAAAAGTA TTTCAAATCG TGCTTTATTA TTGGCAACCC TTGCCGAAGG AACCACGACA CTCACCAATT TACTGGACTC CGACGATATT CGTTATATGT TGGCCTCACT TAAGCAGTTA GGTGTCAGCT ATCGTCTATC GAATAACAAC ACAGTGTGTG AATTAGACGG ATTAGCGGGG CCATTAAACG CGAGTGAAGC GCAAACCCTA TTTTTAGGTA ATGCCGGAAC GGCCATGCGT CCTTTGTGCG CTGCGTTAAC ACTTGGCCAA GGTGATTTCA CATTAACGGG TGAACCCCGT ATGGAGGAGC GCCCCATTGG CGATCTAGTT GATGCGTTAC GTCAACTTGG TGCAGAGGTG AGTTACTTAA AAAATGATGG TTTTCCACCT TTAAGTATTT CATCCACTGG ACTAAATGGT GGCAACGTAG AAATTGCGGG CGATCTTTCT AGCCAGTTCT TAACCGCACT ACTTATGGTT GCCCCTTTAG CGAAAGATGA TGTGAATATT CAGATTAAGG GCGAATTAGT CTCTAAACCT TACATCGATA TTACACTCGC TTTGATGGCA CAGTTTGGGG TTAAGGTTCA AAACAACGAT TACGCATCGT TTGTTATAAA AGCGGGGCAA CGTTATGTTT CTCCGGGTAA AGTACTGGTA GAGGGCGATG CATCCTCTGC GTCGTATTTT CTTGCTGCAG GCGCTATTCA AGGCGGTGAA GTGAAAGTTA CTGGCGTAGG TAAACTCAGC ATTCAAGGTG ATGTAAAGTT TGCCGATGTA TTACAGCAGA TGGGCGCAGA GATTGAGTGG GGCGATGATT ACATTATTTC TCGTGGAGCA AAGCTAACTG CGGTCGACCT TGACATGAAC CACATTCCTG ATGCAGCAAT GACGATTGCA ACGACGGCGC TATTTGCAAC CGGCACAACC CATATTCGTA ATATTTATAA CTGGCGTATT AAAGAGACAG ATCGCTTAGC GGCAATGGCA ACAGAACTGA GAAAAGTGGG GGCAATTGTC GATGAAGGCC ACGATTACAT CAGTGTTACG CCTCCGGCGG AACTAAATAC AGCTGCTATT GATACCTATA GCGATCATCG TATGGCAATG TGTTTTTCTA TGATGGCATT TGCCGATTGT GGCATTACTA TTAATGAGCC TGAGTGTACC TCTAAAACCT TCCCCGATTA TTTTAATCAA TTTAATTCGC TTGCTCATTA A
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Protein sequence | MNQLRLEPIK KVSGTINIPG SKSISNRALL LATLAEGTTT LTNLLDSDDI RYMLASLKQL GVSYRLSNNN TVCELDGLAG PLNASEAQTL FLGNAGTAMR PLCAALTLGQ GDFTLTGEPR MEERPIGDLV DALRQLGAEV SYLKNDGFPP LSISSTGLNG GNVEIAGDLS SQFLTALLMV APLAKDDVNI QIKGELVSKP YIDITLALMA QFGVKVQNND YASFVIKAGQ RYVSPGKVLV EGDASSASYF LAAGAIQGGE VKVTGVGKLS IQGDVKFADV LQQMGAEIEW GDDYIISRGA KLTAVDLDMN HIPDAAMTIA TTALFATGTT HIRNIYNWRI KETDRLAAMA TELRKVGAIV DEGHDYISVT PPAELNTAAI DTYSDHRMAM CFSMMAFADC GITINEPECT SKTFPDYFNQ FNSLAH
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