Gene Spea_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2069 
Symbol 
ID5662462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2508137 
End bp2509228 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content46% 
IMG OID641236664 
Productphosphoserine aminotransferase 
Protein accessionYP_001501924 
Protein GI157961890 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.311647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGA TTTTCAACTT CTGTGCAGGC CCAGCCATGC TCCCCCCTGC TGTTATGCAA 
AAGGCTCAGA AAGAACTGTT AAACTGGAAT GGCCTAGGTA TTTCCGTTAT GGAAATTAGT 
CATCGTAGTA AGGAGTTCAT CGCGTTAACC GAGCAAGCAG AAGCGGACTT ACGCGCTCTG 
ATGGAGATCC CATCCAATTA CCATGTGCTG TTTATGCACG GTGGTGGTCG TGGCCAATTC 
TCTGCTGTTG TGAATAATTT TCTTGGTAAT GATGGTCGAG CCCTCTATCT TGTCGATGGA 
AGCTGGTCAA AGGCTGCGGC TGAAGAGGCT GAAAAGCTAG TCGGTAAGGC AAATATTGAT 
AGCATAGAGC TAGTCAGTGC TGTCAATTGT TTAAACCGAG TTACCCTGCC AGATTTAAGT 
AAAATAGATA AAGATTATCG CTACGTTCAC TACTGTCCAA ATGAGACTGT TGATGGTATC 
GAAATTTTTG ATGATATTAA CAGTCCGTGG CCTGTTATTG CCGATATGTC TTCTAACATT 
TTGTCGCGTA AGATTGATGT TAGTCAGTTC GGTTTGATTT ATGCGGGTGC GCAGAAGAAC 
ATCGGGCCAT CGGGTTTAAG TATCGTAATC GTCCGTGATG ATATGTTGGC CCTACCAAGT 
TTGCCGCAAT CATCCATCAT GGATTATCGC TTAGCGGTAG AAAACGACTC CATGTATAAC 
ACTCCGCCGA CCTTTGCATG GTACTTAGCC GCCGAAGTAT TTGCTTGGCT CAAATGCGTT 
GGGGGAGTAA CTGAGATGGA GAAACTCAAT ATCGAGAAGG CTAGGCGCTT GTATGAGTGT 
ATCGACGAGC TAGATTTCTA CGTCAGCGGC GTAGCAAAAG AGAATCGTAG CCGTATGAAT 
ATTACATTCC AGCTAACCAA TTCTCAGCTA GATAGTCAGT TTTTAGCCGA GGCTCAAGCT 
GCCGGGCTCG TCGCGCTAAA AGGGCATCGT AGTGTTGGTG GTATGCGAGC GAGTTTGTAT 
AACGCTATGC CATTAGCAGG CGTAGATGCT CTAGTCGGAT TTATGAGGGC GTTTGCAGCT 
AAAAATGCTT AA
 
Protein sequence
MSAIFNFCAG PAMLPPAVMQ KAQKELLNWN GLGISVMEIS HRSKEFIALT EQAEADLRAL 
MEIPSNYHVL FMHGGGRGQF SAVVNNFLGN DGRALYLVDG SWSKAAAEEA EKLVGKANID 
SIELVSAVNC LNRVTLPDLS KIDKDYRYVH YCPNETVDGI EIFDDINSPW PVIADMSSNI 
LSRKIDVSQF GLIYAGAQKN IGPSGLSIVI VRDDMLALPS LPQSSIMDYR LAVENDSMYN 
TPPTFAWYLA AEVFAWLKCV GGVTEMEKLN IEKARRLYEC IDELDFYVSG VAKENRSRMN 
ITFQLTNSQL DSQFLAEAQA AGLVALKGHR SVGGMRASLY NAMPLAGVDA LVGFMRAFAA 
KNA