Gene Spea_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2049 
Symbol 
ID5662442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2482835 
End bp2483395 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID641236644 
Productelongation factor P 
Protein accessionYP_001501904 
Protein GI157961870 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000851493 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG CTCATGAACT CCGTCCTGGT AACGTGATCA TGTTAGATGG CAGCCCATGG 
GTTGTTCAAA AAACTGAAAC AACTCGTTCT GGCCGTAACG CTGCTATCGT TAAATTAAAG 
CTTAAGCACG TTCTACAAGA CTCTTCTACT GAAAGCACCT TCAAAGGTGA AGACAAGATG 
GAAGATATTA TTCTAGAGCG TCTAGATTGT ACTTATTCAT ACTTCGCTGA TCCTATGTAC 
GTATTCATGG ATGCTGAATA CAACCAGTAT GATGTTGAAG CTGAAAACCT AGGTGATGCA 
GCTGCATACA TCGTTGACGG TATGGAAGAG AATTGCCAAG TAACTTTCTA CGAAGGCAAA 
GCAATTTCAG TTGAACTACC AACTTCAGTT GTACGTGAAG TAACATACAC TGAGCCTTCA 
GCTCGTGGTG ATACTTCAGG TAAAGTAATG AAGCCAGCTA CCATCACTGG TGGCGGCACG 
CTAAGTGTTG CAGACTTCGT TAAAACTGGC GACATGATTG AAATTGACAC TCGTACTAAC 
GAGTTCAAAA AGCGCGTTTA A
 
Protein sequence
MKTAHELRPG NVIMLDGSPW VVQKTETTRS GRNAAIVKLK LKHVLQDSST ESTFKGEDKM 
EDIILERLDC TYSYFADPMY VFMDAEYNQY DVEAENLGDA AAYIVDGMEE NCQVTFYEGK 
AISVELPTSV VREVTYTEPS ARGDTSGKVM KPATITGGGT LSVADFVKTG DMIEIDTRTN 
EFKKRV