| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2042 |
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| Symbol | |
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| ID | 5662435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2472185 |
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| End bp | 2473129 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236637 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001501897 |
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| Protein GI | 157961863 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.557762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAT CTCGTATCGA TTTGAATTTA TTGGTTTATC TAGACGTGCT GTTACGTGAG
AAAAATGTTA CTAAGGCGGC GGATCAGCTA GGGATCAGTC AACCTGCCAT GAGTAATGGC
TTAAAGCGGT TGAGAATATT ATTCGACGAT CCACTATTAA TACGAACCAG TCAGGGGATG
ACACCGACTG AGCGTGCACA GGAGCTACAG CCTACTATCA GCGAGCTTAT TATTGGTTTA
GAAAAAGCTG TACAACCCCG AGCCGAATTT AATGCGGCCG AGAGTGAGCA AGTGTTTCGA
GTGATGGCCA GTGATTACGC CGAAGCAACA CTTATCCCCC CACTGATTGC TAGGCTTCGC
ACCGAGGCGC CTAATGTCAT TCTCGATATC ATGACACCCA GTGACGTGAG TTTTCCCGAT
GTAGAGCAGG GACGCGTCGA TATGGTTATC AATCGCTTCG ACAGCATTCC ACAATCATTT
CATCAGAAAG TGTTATGGAG TGATGATTTT AGCTGCCTGA TTAGTAAGAA TAATCCCGTG
CTGGATAACT TCTGCCTTGA TAGTTATTTA AAAGCCAACC ATGTCTGGGT CAGTAAAACG
GGGATGGGAG TTGGAGTGGG TATGGATCCT GGTGATGTAC AAAGGTTAGG TTGGGTAGAT
GAAGCGCTTA CCCGAATAGG AGTACAAAGA CGGATCACTG TATTTACCCG GCACTATCAG
GCTGCTTGTT TATTGGCAGA GCAACAAGAT TTGATCGCTA CCATACCGAG TAAGATGGCA
AAGCAGCATG TAAATAACGA GCGAGTCTGT ATCGTGCCAC CGCCGTTTAT TATTCAGCCT
ATCGCACTGA CAATGGCCTG GAGTCCTCTA CTACAGCACA ATCCTGCCCA TAAGTGGATG
CGCCAACTTA TAACCAAAAC TGCTGATAGT TTTGGGCGTG ATTAA
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| Protein sequence | MNISRIDLNL LVYLDVLLRE KNVTKAADQL GISQPAMSNG LKRLRILFDD PLLIRTSQGM
TPTERAQELQ PTISELIIGL EKAVQPRAEF NAAESEQVFR VMASDYAEAT LIPPLIARLR
TEAPNVILDI MTPSDVSFPD VEQGRVDMVI NRFDSIPQSF HQKVLWSDDF SCLISKNNPV
LDNFCLDSYL KANHVWVSKT GMGVGVGMDP GDVQRLGWVD EALTRIGVQR RITVFTRHYQ
AACLLAEQQD LIATIPSKMA KQHVNNERVC IVPPPFIIQP IALTMAWSPL LQHNPAHKWM
RQLITKTADS FGRD
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