Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2033 |
Symbol | |
ID | 5662426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2459679 |
End bp | 2460815 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641236628 |
Product | hydrogenase (NiFe) small subunit HydA |
Protein accession | YP_001501888 |
Protein GI | 157961854 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000339723 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAC ATGAAGCCCT TTACCAACAA GGTGTGGCGC GAATGGAACA ACTTCGCAAG CTACAGCCCC GTACTGGTGA AACGCTACAG CAAAAAATGG AACAAAATGG CATTACTCGT CGCGACTTTA TGAAGTGGAG CGCTGCCGTT ACCGCCATGT TAGCTTTACC CTTACCCTTT AGTACTTTAG TTGCTGAAGC TGCCGAACTT GCAGACCGAG TCCCGCTTGT TTGGTTACAC ATGGCCGAAT GTACAGGCTG CAGTGAGTCG CTAATCCGTA CCGACACACC TAACTTAGAT ACCCTAATCT TTAATCATGT CTCTCTTGAG TACCATGAAA CCTTAATGGC CGCAGCTGGC TGGCAAGCAG AAGAAAATCT TGAGCACGCA TTATCAGCCT ACAAGGGTAA CTATCTGCTT GCTGTTGAGG GCGCAGTTCC TACTGCAAAT AATGGCGCTT ACTTAACGGT GGGCTGTAAA GGCCATACTG GCCTGCATAT CATTAAAGAA GCTGCCGAAG GCGCTGCAGC AATTATTTCT GTCGGTACGT GCGCTGCCTT TGGCGGTATT CAAGCTGCCG CACCTAACCC AACAGGGGCC AAAGGTGTTT ACGAAGTCGT TGATAGAACC GTTATTAACT TAGGTGGCTG CCCACCAAGT GAGAAAAACA TCGTCGGCAC GCTGATGTAT TTCATCATGT TTGGTAAGTT ACCTGCCCTT GATATGTTTA ACCGTCCTAA GTGGGCATAC GGTGCTCGCG TTCACGATAA CTGCGAGCGT CGTGGCCGTT TTGATGCTGG CGAGTTTGTT GAAGAGTTCG GCGACCAGGG CGCAAAAGAT GGCTATTGCC TCTATAAGGT TGGCTGTAAG GGTCCTTACA CCTATAACAA CTGTCCAACC GAAAGATTCA ACCACCATAC CAGTTGGCCA GTGCTTGCCG GTCACGGCTG TATCGGCTGC TCTGAGCCAA ACTTCTGGGA CGATATGGCT GATTTTGAGA AACCTTTAGG AAGGCAATTA CTGCATGGTC TAGATGCGAC AAGCGACACT GTCGGCGCGG TCATTCTAGG TGCAACCGCA GTCGGAATTG GCGCCCACGC TGTCGCCAGT ATTTTTGCCA AATCTGAAGA GGAATAA
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Protein sequence | METHEALYQQ GVARMEQLRK LQPRTGETLQ QKMEQNGITR RDFMKWSAAV TAMLALPLPF STLVAEAAEL ADRVPLVWLH MAECTGCSES LIRTDTPNLD TLIFNHVSLE YHETLMAAAG WQAEENLEHA LSAYKGNYLL AVEGAVPTAN NGAYLTVGCK GHTGLHIIKE AAEGAAAIIS VGTCAAFGGI QAAAPNPTGA KGVYEVVDRT VINLGGCPPS EKNIVGTLMY FIMFGKLPAL DMFNRPKWAY GARVHDNCER RGRFDAGEFV EEFGDQGAKD GYCLYKVGCK GPYTYNNCPT ERFNHHTSWP VLAGHGCIGC SEPNFWDDMA DFEKPLGRQL LHGLDATSDT VGAVILGATA VGIGAHAVAS IFAKSEEE
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