| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2027 |
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| Symbol | |
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| ID | 5662420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2451691 |
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| End bp | 2452452 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236622 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_001501882 |
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| Protein GI | 157961848 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCCAAG ATTGTGGTTG TTCGATTACT CGTCATGATC ATTTATTAAG TTCGGGTCAT
TCGCATTCAA AAACTGACGA TAATATCGCA ACGAACCCTC AGCTCAACGA TAAAAAGACC
CTATCTCTCA TTCATAAGAT TTTAGATAAA AACGATATTG AAGCGCAGCA TAACCGAGCT
CATTTCGAAG CTAAAGGGAT CACCGCCTTT AATTTAATGA GCAGTCCTGG TAGTGGTAAA
ACCACACTGT TAGAACATCT ACATGAATAC ACTAACCTTA AGTATGCTGT TATTGAAGGG
GATCTTGAAA CCTCCAGAGA TGCAGACAGA CTAAAAGCAA AAGGTATCGA TGCCTTTCAG
ATCCAAACTG GTGCAGCTTG TCATCTAGAT GCGTTTATGG TGCATAGCGC CTTACATCAC
ATTAACTTAG ACCCTCTGGA TATCTGCTTT GTTGAAAATG TCGGCAACTT AGTCTGCCCC
GCCAGTTACG ATGTTGGCAC TCATAAAAAT ATCGTGCTTT TGTCTGTGCC TGAAGGCGAT
GACAAAATTG AGAAGTACCC CGTCATGTTC CGCCGTGCAG ATTTAGTGCT GATCACTAAG
TCTGATCTTA TGCCCTATTT TGACTTTAGC ATGGAGGAGT CACGGGCCCA GCTCAAAAAA
CTGAATCCCA ACGTTGAGTT AATGGAGATA TCTGTTAAAG AGCCACAATC ACTCATTCAG
GTCGCAGACT GGCTTTCAAG ACAAAAGGGA GCAACTGCCT AA
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| Protein sequence | MCQDCGCSIT RHDHLLSSGH SHSKTDDNIA TNPQLNDKKT LSLIHKILDK NDIEAQHNRA
HFEAKGITAF NLMSSPGSGK TTLLEHLHEY TNLKYAVIEG DLETSRDADR LKAKGIDAFQ
IQTGAACHLD AFMVHSALHH INLDPLDICF VENVGNLVCP ASYDVGTHKN IVLLSVPEGD
DKIEKYPVMF RRADLVLITK SDLMPYFDFS MEESRAQLKK LNPNVELMEI SVKEPQSLIQ
VADWLSRQKG ATA
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