| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2018 |
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| Symbol | |
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| ID | 5662411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2443277 |
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| End bp | 2444503 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641236613 |
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| Product | Flp pilus assembly protein ATPase CpaE-like protein |
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| Protein accession | YP_001501873 |
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| Protein GI | 157961839 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.724066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAC CCTTAGAGCT ATGTGTCTCG AATAATGACC AACAAATACC TATGACTTAT
TGTTTACCTT TTCCTGTGCA AGCAGTTGTT GCAAGTAATG GAAGTCGAAC GCTTACTTGG
CTAACGGAAA GTTTGAACCA GTTTGAAAAT TTAAAATGGC AGTCGTCAAC TTATGAGGAT
GATCAATTAG CAAAAGAAAA AAATAGGTTT AATCTAGTGT TATTAGTCTT GCCTTCAGAT
GAGTTGGAGG CTAAGAAAGC ATTATCCTAT GCGGCAAATT TTGACTGCGA CATTATTTTA
ATCGGCTTTA ATACGCCACA GAATATTCTA AGATTAGCAT TTCAATATGA TGTTAGTGAT
TTTATTCCTT CATCATCACC GTTACATGAA TTTTTTACTT CTTTAGAGAA AGTTTCTGAC
CGACTCGTAA AGAATGCTGA GCTAGCTCCT GTGGTGGCTG TGATAAACGG CAAGGCTGGT
TCTGGAGCAA GCTTTATATC CGCTAGTTTA GCCGACGTTG CCTCTCAAAG AGAAGGGAGC
GATCTTGCAC TCCTGGATAT GGACCTTCAC CACGGCACTC TTTCACATAT TCTTGGCTAT
GACGCTAAGT ATTCAATTTG TGATGTGATT GAAACTATCG AAGATCTAGA TGAGATCGCG
TTAAAAAGCA CCATGACTAA GAAAGGAAAC CTTAGCCTAC TTGCTGCTAA GCCCTTCGAA
CTTCTTACTT TAGATCAAGA TGTTGATTTT AGTCGTATTA ATGAACTGAT GTGGAAATAC
CGTCAGTTCT ATAAGCAAGT TATTTTAGAC TTCTCTAGAG GACCTGAAGA TTGGAATTGT
AATTTGTTAT TGAGTGCGAC AATTTTAGTT GTAACTCAAC AAAATATAAT GCACTTACGT
CAAACCAAAG ACTTGATTAA TCAATTGACG ACAAGGATGG GGATTAATTC AAATCAGATA
ACTTTGGTTG TAAATCGATA TAACAAAAAC TCGAATATAA AATTATCTGA TATCGAAGAA
GCAATTGGAA TATCAAGCAT AAACACAGTC GTTAATGATT ATAAGTTATC GAACGAGTGT
GTAGATTTAG GGAAACCGAT AACTCAAGTA GCAAAAAAGC ACAGAATAGT TACCGATGTA
CGCTCTTTAG CGGATAGGTT TTTACCGATT AATAATGAAC AAAATAAAAA AAGTACAAGT
TTTTGGAAGC GACTTTTAGG AAACTAA
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| Protein sequence | MDKPLELCVS NNDQQIPMTY CLPFPVQAVV ASNGSRTLTW LTESLNQFEN LKWQSSTYED
DQLAKEKNRF NLVLLVLPSD ELEAKKALSY AANFDCDIIL IGFNTPQNIL RLAFQYDVSD
FIPSSSPLHE FFTSLEKVSD RLVKNAELAP VVAVINGKAG SGASFISASL ADVASQREGS
DLALLDMDLH HGTLSHILGY DAKYSICDVI ETIEDLDEIA LKSTMTKKGN LSLLAAKPFE
LLTLDQDVDF SRINELMWKY RQFYKQVILD FSRGPEDWNC NLLLSATILV VTQQNIMHLR
QTKDLINQLT TRMGINSNQI TLVVNRYNKN SNIKLSDIEE AIGISSINTV VNDYKLSNEC
VDLGKPITQV AKKHRIVTDV RSLADRFLPI NNEQNKKSTS FWKRLLGN
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