| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2012 |
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| Symbol | |
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| ID | 5662405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2438231 |
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| End bp | 2439049 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641236607 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001501867 |
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| Protein GI | 157961833 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA AAACCGTCTT ATTTGTCATT TTGTCATTAG TGTTTGGAGT TACTGCTGTT
TATCTTGCGC AGAACTGGCT GAAAACAAAT ACTAAAACAG AAGCAGTAGC ATCAACATCC
AATGTGATGA CTATGGTGAC AGAGGTACCT TTGGGGACAA TTATAGAAAG AAAGCATCTC
GCCTTAACTC CAGTGGCTGA CAATTTAATC CCAGAAGGGG CTATCACGGA TATTACCGAG
GCAGAAGGGT TTGTGGTCAA GCATCGACTT TATCAAGGGG AGGTATTACG CAAAGAGCGA
ATAACTCCTA AAGGAGAGGG GAGCACATTA GCCAGTTTGA TTACCCCGAC AATGCGTGCT
GTTACGATAA GGGTAAACGA TGTTGTTGGT GTGGCTGGTT TCCTACTGCC TGGCAACAGA
GTCGATATTA TCAATATTTT TACAACTCCT AGTCTAAAAA CGGACATTGT GCTTTCAAAC
GTGAAAATTC TCGCTATCGA CCAAAAAGCA TCGAATGATG AGAACAAACC AGTCTTAGTG
CGAGCGGTAA CATTAGAATT AAGCTTAGAG CAGGCTGAAA CCTTGATGAT TGCCAAGAGT
CGAGGTTCTT TGCAGTTGGC ATTAAGAAAT CCCAATGACA CGGCAGTTAT AGAATTAGCA
GATATTGAAG AAGCGAATAA AACAGAAAAG ACTGATAAAG AAGTGCTTTC TCAAACTGTT
AAAGTCGCAC AGTTTGCCAG AGTATCTGAA GCTAGCACAA ATAAGGTTTT GTTGCTTAAA
GGCATGAGTG AGCAAGAGAT AAAAATCGAC AACAATTAA
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| Protein sequence | MNNKTVLFVI LSLVFGVTAV YLAQNWLKTN TKTEAVASTS NVMTMVTEVP LGTIIERKHL
ALTPVADNLI PEGAITDITE AEGFVVKHRL YQGEVLRKER ITPKGEGSTL ASLITPTMRA
VTIRVNDVVG VAGFLLPGNR VDIINIFTTP SLKTDIVLSN VKILAIDQKA SNDENKPVLV
RAVTLELSLE QAETLMIAKS RGSLQLALRN PNDTAVIELA DIEEANKTEK TDKEVLSQTV
KVAQFARVSE ASTNKVLLLK GMSEQEIKID NN
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