| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2006 |
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| Symbol | |
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| ID | 5662399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2429824 |
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| End bp | 2431041 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236601 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001501861 |
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| Protein GI | 157961827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.792625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAT CTTCGCTATC TCCCAGCTCA AATGAACTTG TGATCAGTAT TCTCGACCTT
GTTTTATCAG AGGGTAAGCC GCTTGATCGT GCTTATTCTC AACATTTTTC CGGCTTAAAA
CTCGAGCCGA CAGAGCAGGG GCGTATCACC TTTGTTGTGG GCGATATACT AAGAAGATTG
AACCTTTACT GTTACTTATC AGATGTGACA CCTGAAGAGA TGGCTCGTTT AGGTTCACGT
CTATTAAATG TTTGGCATCT TTTTAATGAG TTACCTTTGC CTAAAATGCA GTATTCGTTA
CAAGTCGATA CTGCAGATTT GGCCTCCCGT ATCGAGTCTG CTAAAGCGCA ACCGGTACTA
TGGGATGGTT GCCCAGATTG GCTAAACCAA ATGGGTGAAG CTCAGATGGG CGATAAATGG
CCTGCAGAAA GAGCTGCGCT AAACAAGCCT GCTAAACGTT TTTTGCGTAC AAATATCCTA
AAGTGCACAC GCGATGAACT TGCCAATGCG CTACGTAAAG AGGGAGTGCA AACGGCTAGC
GTTGAAGGCG TCGATACAGC CTTAGAAGTT GTTTCTGATT CTGCATTATT TAGAACCGAA
GCCTTTAAGA AAGGTTGGTT TGAGCAGCAA GATGCCGGTT CTCAATTAGT GGCATTAGCG
CTTGATGCAA AGCCTGGAAT GAGAGTCGTA GATGCGTGTG CAGGTGCTGG TGGTAAAACC
TTATCTATTT CTGCACAAAT GCAGGGAAAA GGTCGTTTAC TCGCGATGGA CGTAGAGCAA
TGGAAACTTG ATAACCTGAA GCAGCGTGCG CGCCGAGCAG GTGCTCATAA CGTAGAAACT
CGAATTATCG CCAGCAGTAA GACCATTAAG CGTTTGAAGC TAACCGCTGA CAGAGTGTTA
CTAGACGTAC CATGCTCTGG TTTAGGCGTA CTGAAGCGTA ACCCTGACGC AAAATGGCGT
GATACCCCAG AGCGCTTACC TGTACTGGTC GAGCTTCAAA AGCATATTTT GCAAAGCTAT
AGTCGTATGG TGAAAGTAGG CGGCATATTG GTTTATGCGA CATGCTCAAT TATGCCAGAA
GAGAACCGCG ATCAAATTGA CGCATTTCTT GCTGAGAATA AGCACTTCAG ATTCATCGAA
GATGAGACAA TAAGCCCAGC AGAAACCGGT TTTGATGGTT TCTACTTAGC AAAATTAGAG
CGTATATCAG AAGAATAA
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| Protein sequence | MLKSSLSPSS NELVISILDL VLSEGKPLDR AYSQHFSGLK LEPTEQGRIT FVVGDILRRL
NLYCYLSDVT PEEMARLGSR LLNVWHLFNE LPLPKMQYSL QVDTADLASR IESAKAQPVL
WDGCPDWLNQ MGEAQMGDKW PAERAALNKP AKRFLRTNIL KCTRDELANA LRKEGVQTAS
VEGVDTALEV VSDSALFRTE AFKKGWFEQQ DAGSQLVALA LDAKPGMRVV DACAGAGGKT
LSISAQMQGK GRLLAMDVEQ WKLDNLKQRA RRAGAHNVET RIIASSKTIK RLKLTADRVL
LDVPCSGLGV LKRNPDAKWR DTPERLPVLV ELQKHILQSY SRMVKVGGIL VYATCSIMPE
ENRDQIDAFL AENKHFRFIE DETISPAETG FDGFYLAKLE RISEE
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