| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2004 |
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| Symbol | |
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| ID | 5662397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2427291 |
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| End bp | 2428826 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236599 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001501859 |
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| Protein GI | 157961825 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.447226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA ATCAAAGTTT AATCAGGAAG TCACATTTTT TAGGCACAAA GATCCGAAAC
TTGAGGAAAA GAAACCACCT CACGATGGAA GATCTCTCCG CCCGGTGCGT ACGCGTAGAT
CCCGAATCGG CTCCCTCTGT GTCCTACTTG TCGATGATTG AACGCGGTAA AAGAGTACCA
AGTGCTGGAA TGCTAGCCGT TATTGCCGCC GTTTTTCAAA AAGAGCTGGA CTGGTTCCTA
GATGATGTCC CCGAAGACGA TGCGATTACG CCTAATAAAG GCCGTCGTGG CGGGATTAGT
GGTATGGCGT TAGAGCCTAG CTTTCTATTT TCCAACGATA TTTTACAAAT TGCGATCCCG
GAGATGTTAT CGCAAACTGG AACCACGGGT AGAGAATTTG CCCACCTATT AATTCGCGCA
CATCAGGAAC ATCATCAGAA CCACTTTCCC GATCTTGAAC GTGCCGCCGA GGAGGTAGGC
AAGAAACGCT TGCCGCTGGC GATTAACGAT CTCAAGGATA TCGCTAAGTC GTTAGGATTA
AAATTAAAGT GGATAGACAG AACGCCACAG GAAGTGGTCG ATGAAATGGG AGTCAGCACC
ACGCACGTTG TGACCTCCTT TTTCGAGCCT CCTTCAACCA TCTATTTGAA CAAGATGCTT
AAATCATTTG TGACTAGACT TAAGTATGAC TTAGCTGTGC ATATAGGCCA TTGCGTCCTT
CACAATAAAG ATGGCCTAAA ATGCGTCTTA ACAGCGGGAA GACGGCATAC TGCGGCCGAC
GATGAAATTA GCACTCCTGT TTCATCGACA CTAAACGCAC AAGATATTTT ACATGCTTGG
CGTGATTTCG AATCCAGCTT CTTTGCCGGC GCTCTGCTCT GCCCTAAGGT GCCCTTCAGG
CAACTTCTAG ACCGTCACGG ATACGAAATT AAGGTCAATG AAGCTTTAGG GATCTCAGCG
TCGGTAGCAA TGCGCCGCAT GACGGTAGTT TCGCCTTATC CACATTGGCA TTACTTCGAT
GCTTATGCTC CTGGAAAGCT TAAGGCTGTA TATAGAGGCA ATGGTATTCC ACTACCTTGG
GGAAATATGC GAGTAGTAGA AGATCCTTGC CAACATTGGG CCGTATTTAG AATGATTAAC
GAGCCTAAGG TCGGTACATC AGCTCAAATC TCCATACTTG ATGTTGCCGA AAAACCAAGG
ATCTACTGCT GTGAGTCGAT AAAAGTAGAA GATATGGCTG GTAATAACCA CGTATTATGC
GCTGGAATCG ATCTTAACCC TGCGATTGAT GCTCAGGGCG GCGACGCCGC GTCTATTGCT
GCAGAGTTAA AGCAATCCTG CGCAAGCAAT AGTGGCTCGG TTGAGATGCC AACGAGTATT
AAAAAAGATT TGATGAGTGT TGCCAAAATC CTCAACATCA ATTGGATTGA AAGAGGCATT
CAAAACGAGG CTAGATTAAT ATGCTCAAGA GGTGCGGTTT GTCCAAGGCA ACCTAGCTGT
TATCGAGCGG GTAAATCTCA GTGTAGTGAG AGCTAG
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| Protein sequence | MKNNQSLIRK SHFLGTKIRN LRKRNHLTME DLSARCVRVD PESAPSVSYL SMIERGKRVP
SAGMLAVIAA VFQKELDWFL DDVPEDDAIT PNKGRRGGIS GMALEPSFLF SNDILQIAIP
EMLSQTGTTG REFAHLLIRA HQEHHQNHFP DLERAAEEVG KKRLPLAIND LKDIAKSLGL
KLKWIDRTPQ EVVDEMGVST THVVTSFFEP PSTIYLNKML KSFVTRLKYD LAVHIGHCVL
HNKDGLKCVL TAGRRHTAAD DEISTPVSST LNAQDILHAW RDFESSFFAG ALLCPKVPFR
QLLDRHGYEI KVNEALGISA SVAMRRMTVV SPYPHWHYFD AYAPGKLKAV YRGNGIPLPW
GNMRVVEDPC QHWAVFRMIN EPKVGTSAQI SILDVAEKPR IYCCESIKVE DMAGNNHVLC
AGIDLNPAID AQGGDAASIA AELKQSCASN SGSVEMPTSI KKDLMSVAKI LNINWIERGI
QNEARLICSR GAVCPRQPSC YRAGKSQCSE S
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