Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2000 |
Symbol | |
ID | 5662393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2423747 |
End bp | 2424892 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236595 |
Product | cupin 4 family protein |
Protein accession | YP_001501855 |
Protein GI | 157961821 |
COG category | [S] Function unknown |
COG ID | [COG2850] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTAG ATATCAATGG TTTAACACCA GAGCAGTTTC TCAAAGAATA CTGGCAAAAA AAACCACTAG TGATCCGTCA AGGATTTAAA AACTTTCAAG ATCTGCTCTC ACCTGACGAG ATGGCAGGGC TGGCTTGTGA TGAAATGGTG GAGTCTCGTC GAGTTTATCG AGAGAAGGGA GACTGGCAGG CGGAGTTTGG GCCATTTGAA TCTTATGAGC ATTTAGGCGA GAAGGATTGG ACCTTAATCG TACAGGCATT AAATAATTGG GTTCCTGCAG CTGAAGACTT ACTTAAATGC TTTGATTTTA TACCTCGCTG GCGTTTAGAT GACGTGATGG TTAGCTACGC GGTTCCCGGT GGTGGAGTTG GGCCGCATAT TGACCTTTAT GACGTGTTTA TCTGTCAAGG TTCAGGGCGT CGCCGATGGC GTGTAGGCGA CTTAGGTCCT CATAAAGAGT TTGCTGCGCA TCCAGCACTG CTGCATACCG AAGCATTTGA CCCGATCATA GATGTTGAAC TCTTGCCTGG TGATATTCTC TATCTACCGC CAGGGTATCC TCATGATGGC GTGACACTTG AGCCGTCAAT GAGCTTTTCT GTTGGTTACC GAACAGCTTC GGCGAAGGAT ATGGTGAGTG CTTTGGCCGA TCACCTAATC GATAACGAAC AAGGTACTAA GCAGATCACG GATCCCGATC GTGGCTTGAG CCAACATTCT GGTTTAATCG ATGAACAAGA TCTAGGACGT ATCAAGCAGC AACTCATCGA AACGCTAGAT GATACACTGA TCAGTGAATT CAGTGGTCGC TATCTGACTC AATCTAAGTG CGAATTAGAC CTACCTGAAG AGCAATTAGG CTTCCAATTA GACGATATAA AGGCAATCAT CTCAGAGCAG CCGTTAATTC GTTTGGGCGG GCTACGTTGT CTTTATTTCG CGACCAGTCT TGAGTCTGGT GTCATGTACA TTAATGGCGA GCAAGTGGAA CTAGGAGAAG GCAGTTCAGA GGTGATTGAA GCGCTCTGTA ATCAACAGCA GCTAACCCTC GAAGACATGT CTACTTGGTT AGAAAATGAA GCTGTGATGA CTCAATTGAC CGACTGGGTT AATGCGGGTT ATTGGTACTT CGATGATGTA GAGTAA
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Protein sequence | MQLDINGLTP EQFLKEYWQK KPLVIRQGFK NFQDLLSPDE MAGLACDEMV ESRRVYREKG DWQAEFGPFE SYEHLGEKDW TLIVQALNNW VPAAEDLLKC FDFIPRWRLD DVMVSYAVPG GGVGPHIDLY DVFICQGSGR RRWRVGDLGP HKEFAAHPAL LHTEAFDPII DVELLPGDIL YLPPGYPHDG VTLEPSMSFS VGYRTASAKD MVSALADHLI DNEQGTKQIT DPDRGLSQHS GLIDEQDLGR IKQQLIETLD DTLISEFSGR YLTQSKCELD LPEEQLGFQL DDIKAIISEQ PLIRLGGLRC LYFATSLESG VMYINGEQVE LGEGSSEVIE ALCNQQQLTL EDMSTWLENE AVMTQLTDWV NAGYWYFDDV E
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