| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1994 |
|---|
| Symbol | |
|---|
| ID | 5662387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 2417516 |
|---|
| End bp | 2419219 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641236589 |
|---|
| Product | phosphoenolpyruvate-protein phosphotransferase |
|---|
| Protein accession | YP_001501849 |
|---|
| Protein GI | 157961815 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTA CGGGAATCGT TGTTTCATCG GGTATAGCTT TCGGACAAGC CCTACATCTT
AACTTACAGC ACCAGAAAAT CGATTATCGT GTTATCCCAT TAGCCCAAGT CCCCATTGAA
ATTGAAAGCC TCAAAACAGC TTTTGAGCAA CAAAAGCAAC ATTTAACTCA AGGCCTCGCA
AAATTAGATC CAAGCACAAG CCATTTTGAA CTCATTGAGG CAGACATCCT CATTCTCGAT
GATGAAGAAT TGCTAGCCCA AATTAAAGAC GCTATCTCAA AGTTACAGAT CAGAGCAGCT
GCGGCCATTG AGCGGATCTT TACTTATCAA GCATCAGAAT TAGAGCAGTT AGATGATCCC
TATTTAGCCA ATCGAGCCGA AGATATATTG TGCTTGAGTA GCCGCCTTAT CGCGCGCTTA
CACGGCGCCC AACATCTGGA CTTAAGCCAG CTAAATCAAG ATACCATTAT CTTCGCTCAT
GACTTAACAC CAGCAGAGTT TGCCATGTTG CCTCTTAAGC ATATTAAGGG CTTAGTGCTC
AATACTGGTG GCATAACGAG TCATACAGCC ATTCTAGCTC GAAGTGCAGG GATCCCTGCG
TTGCTTAGTT GCCAATTTGA CGGCGAGCAG ATCAAAAATG GTACCCAAGT TGTTCTTAAC
GCTATCGAAG GTGAGCTCGT CATTAAGCCA AGTCCTGAAC ATCTAGCTCA ACTATATAGG
CTGCAGCAAC AAGATATTGA ACGTAAGCAA CAGTTATTGA CCCTTAAAGA TCTACCTACT
GAGACTTTAG ACGCTCATCA GGTTTCATTA TTGGCAAACG TTGGTAGCTT AAATGAAATT
AGCCATTTGG CCGATGTAGG TGCGGAGGGA ATTGGTCTGT TTCGTACTGA ATTTATGTTA
ATGAACACCA GTATCCTTCC TGATGAGAAA ACCCAGTATC ACTTCTATTG TGATGCGCTG
CATTTAATGG CTGGAAAAAC CTTTACCATA CGAACCTTAG ATGTCGGCGC AGATAAAGAG
CTACCTTGCT TAACGCCACT GGTAGAAGAC AATCCCGCAT TAGGCATGAG AGGTATTCGC
TATAGTTTGG CCAATCCTCA ACTTTTTATC ACCCAAGTGA AAGCTATTTT ACGGGCAGCA
AATCATGGCC CAATCCGACT GATGTTCCCA ATGATCAATC AGGTCGAAGA GCTAGAAGCA
TTATTTGACT TAATTGAGGC CTGTAAGCTC CAGCTAATTG AGGAAGAAAA AGGCTTCGGA
CAGTTAAGCT ATGGCATAGT CGTAGAGACG CCGGCAGCAG TACTAAACCT TGAATCCATG
CTACCGCAAC TGGATTTTAT CAGTATAGGC ACCAACGATC TCACCCAGTA CACTATGGCT
GCGGATCGGA CAAATCCTTC ACTCACAAGC GAGTACCCTT CGCTTTCACC AGCAGTATTG
CACCTTATTA AAACAACGAT AGATCTTGCT CAGCAACACC AAGTCAAGGT TTCACTCTGC
GGAGAATTAG CCAGCGAGCC TAAAGTTGCT CCTTTACTAG TAGGTATGGG GATCGATGAG
CTAAGCGTTA ATTTAAGTTC ATTGTTAGAG GTAAAATCTG CAATCCGTGA TATAAGTTAT
CAAACCTGTC TAGCACTTGC GAAACATGCA ATTAAAATAA AAAGAATCGA AGAATTAAAT
ATTTACATTA ATGGTCTCAA CTGA
|
|---|
| Protein sequence | MSITGIVVSS GIAFGQALHL NLQHQKIDYR VIPLAQVPIE IESLKTAFEQ QKQHLTQGLA
KLDPSTSHFE LIEADILILD DEELLAQIKD AISKLQIRAA AAIERIFTYQ ASELEQLDDP
YLANRAEDIL CLSSRLIARL HGAQHLDLSQ LNQDTIIFAH DLTPAEFAML PLKHIKGLVL
NTGGITSHTA ILARSAGIPA LLSCQFDGEQ IKNGTQVVLN AIEGELVIKP SPEHLAQLYR
LQQQDIERKQ QLLTLKDLPT ETLDAHQVSL LANVGSLNEI SHLADVGAEG IGLFRTEFML
MNTSILPDEK TQYHFYCDAL HLMAGKTFTI RTLDVGADKE LPCLTPLVED NPALGMRGIR
YSLANPQLFI TQVKAILRAA NHGPIRLMFP MINQVEELEA LFDLIEACKL QLIEEEKGFG
QLSYGIVVET PAAVLNLESM LPQLDFISIG TNDLTQYTMA ADRTNPSLTS EYPSLSPAVL
HLIKTTIDLA QQHQVKVSLC GELASEPKVA PLLVGMGIDE LSVNLSSLLE VKSAIRDISY
QTCLALAKHA IKIKRIEELN IYINGLN
|
|---|
| |