| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1991 |
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| Symbol | |
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| ID | 5662384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2415285 |
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| End bp | 2416430 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236586 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001501846 |
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| Protein GI | 157961812 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAAC TCCAAGAATC TGCGGTACTT AGCCTAGCAA AAGATCTTAT TTCTCGTCCT
TCCGTGACAC CTTTAGATGA AGGCTGTCAA TCGCTTATGG CTGAGCGACT GAGTCAAGCG
GGTTTTGAAA TCGAATCTAT GGTATTTGAT GATACCACCA ATATGTGGGC TCGAAGGGGC
ACTCAGTCTC CAGTCTTTTG TTTTGCAGGG CATACTGATG TCGTTCCAGT TGGAGATCTC
AACCGCTGGC ACACTCCGCC ATTTGAGCCT GTGGTGATTG ATGATTACCT TCATGGTCGC
GGCGCTGCCG ATATGAAAGG CTCCTTAGCT GCAATGCTTG TTGCAACTGA GCGCTTCGTT
AACAAACATC CAGACCACCA AGGTTCTATC GCCTTTCTTA TTACCAGTGA TGAAGAAGGG
CCTTTCATTA ATGGCACCAC ACGCGTTATC GATACCCTCG AAGCGCGTAA TGAAAAGATC
ACTTGGTCAT TAGTTGGCGA GCCTTCGTCG ACCCATAAAC TGGGTGATAT TGTAAAAAAT
GGCCGCCGAG GCAGCCTCAC CGGTAACTTA ACGGTTAAAG GGATCCAAGG TCATGTTGCC
TACCCTCACC TAGCTGATAA TCCCATTCAT AAGGCTGCTC CTGCATTAGA CGAGTTAGCT
CGCATGAAAT GGGATAACGG TAATGAATTC TTCCCGCCAA CCAGTTTTCA AATAGCCAAT
ATCAATGGCG GTACGGGTGC CTCGAATGTG ATCCCTGGTG CGTTAGAAGT GATGTTCAAT
TTCCGTTACT CTACCGAAGT CACGGCTGAG ATCTTGATAG AGCGCGTTTT AAACATTCTC
GATGCGCACG GCTTAGACTA CGATATTAGC TGGGTTTATA ACGGATTACC TTTCTTAACC
GGAGAAGGTC CATTATTGGA AGCCACAAAA GCTGCCATCA AGAAGGTAAC AGGTACAGAT
ACCGATCCAC AGACATCGGG TGGCACCTCT GATGGTCGAT TTATCGCACC AACTGGGGCC
CAAGTCATCG AGGTCGGTCC GGTGAATGCT ACGATTCATA AAGTTAACGA ATGCGTTAAG
GTCTCCGATC TTGAGCTACT CACCGACTGT TATGAAGCCA TTTTGGAAAA TTTACTTTGC
AAGTAA
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| Protein sequence | MSQLQESAVL SLAKDLISRP SVTPLDEGCQ SLMAERLSQA GFEIESMVFD DTTNMWARRG
TQSPVFCFAG HTDVVPVGDL NRWHTPPFEP VVIDDYLHGR GAADMKGSLA AMLVATERFV
NKHPDHQGSI AFLITSDEEG PFINGTTRVI DTLEARNEKI TWSLVGEPSS THKLGDIVKN
GRRGSLTGNL TVKGIQGHVA YPHLADNPIH KAAPALDELA RMKWDNGNEF FPPTSFQIAN
INGGTGASNV IPGALEVMFN FRYSTEVTAE ILIERVLNIL DAHGLDYDIS WVYNGLPFLT
GEGPLLEATK AAIKKVTGTD TDPQTSGGTS DGRFIAPTGA QVIEVGPVNA TIHKVNECVK
VSDLELLTDC YEAILENLLC K
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