Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1968 |
Symbol | |
ID | 5662362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2393609 |
End bp | 2395546 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236565 |
Product | hypothetical protein |
Protein accession | YP_001501825 |
Protein GI | 157961791 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00352196 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGTT CCTTATGCTG CATATTGATT AGTGCAATGG GGCTTACTGC ATGCGGTGGT AGTAGTGACA GCTCGACTGA AAGCCCTGGT GACATCACTC CTCCACCAGT TGTACCTGAT GGTTTAGTCC GCTGTGACAC ACAATTCCAG CTTGATCAAA CCACAACCAC TTCTGGCCTT GTGTTTCTTA CTGAACCTAA CTATAAATCC GGTCAGCCCG CTGCAATCAT TGCAACACTC CAAGGAAAGC ATGTCACTGA ATATCAATTT AACTGGACTC AGACTGCTGG TTCAAAGCTC ATTTTAAAAA GCAGCAAAAG CCCTGTTTTA GCATTTACAG CACACGATAC AGGAAGCTAC AAATTCGAAG TGACAGCTGT GGGCAGGCAG TCATCTTTTA CACAATCAAT TGAAATAAAT GTTGAGGCTG GTAGTGATGT TCAAGTTTCT ACACGTGTGG ATCATCAGGT AACAGAAGGC AACTCGGTTA GCTTTAGAGT CGACACACCA GAAACTAACC CCCTTTCACA GATAAGCTGG TGTATTGCTG GCGGCCCAGC TCTTAATGTT GACATAAGTG CCCCAGAGAA AGCGTTATTC ACCGCGCCTA ATGTCGATGA AGACACGCTA TCCACCCTCA GGGTTTCTGC GGTTATTAAC GGTCAATCCG TGACAGATGA TGTACATCTA CTCATCACAA AAGAAGGTAG CATCACTTCA CAATATTTTG ATGAAAGAGT GGCTAAAACC TTTGCCTATA ACCTCAGTTC GCCCTACAAA GATGACTTAC AGCCATGTGT CTATTCCAAT CAACTTCAAC AAAGTTGCAC TATATCCCGT CTGCCGCTAA TCGGTCAGTT GGGGGGGATA AACAAGCAGG CGATATTAGA CAGACTCTTA GTCTCTCATC ATTGGATGGG AGAGAATTTC GAATACTTCC TTGAGAATTT AGATCCAAAC AGCGATTTTG CCACCCTTTT ACAGTCTGTC ACTGCCATTG TAATTAGCTA TGATGTACGT CCCTCATTTT ACTGGGTTGT GACAGGCGCT ATTTACTTAG ATCCGAATGA TCTTTGGTTA CTTGCTGAAG AGCGTGACAC CATAAATGAA GCACCTGATT ACCGCAGTAG TTTTGGTAAT GATTTAAACT TCTTAATGCC TTGGCGATAT GTAAAGGACA ATAATTACAC TTCCTATGTT GTACCAAGAA GTGTACGTGC AGATCGAACA GCAGAGGAAA TGATGCCTGA CTTAGCCTCA CTTCTCTATC ATGAACTGGC ACACGCAAAT GACTTTTTCC CAAGGAGCGT ACACACAAGC TTATCAGGCC CCACTCTACT CGATGACTAT TTTCGTCGCA GCGATGCCAA ACAGCTCGTT TCCGATCAAC TTACGGCTTC CTACCCATTA AATAGTCAGG AAATGGCTAA TTTAGCAGAG GTTAGTTTTA AAGGTGCGAC GGCTAATGGA ACCCAAAAGG CATACAATGC CGCCGATATC AGTAGTTTCT TTTCTCCTGA TCGAGCCTCG GACTATTATG CCTACTCCAC GACACGAGAA GATGCTGCAA TGTTATTTGA AGAAGCCTTG ATGAGTCACA GATATTCAAT TCAACGGGAT GTCGCGGTTA CCGATAAACC TGAAAACCCA ACTGGTAGCA CTATTAACGT GGACTGGGGA CAACGGGGCC GTATTGGCGA TGCTAGTTTA GAGAGTCGAG CCGCATTTGT CATCAACCAG ATGATGCCAG AGCTTAACGG CGCTGCGCTA GTCAATGGCT TACCAGAACC TATAGCAATG AAACAAGGGC TGTCTTGGTC TGAAAACTTA ATGTTGTCCC CGTCGACCCA ATCACAATTG AATCGAACCT CAGCTAGCGC TACTTTTACT CCAGAGATCC GCTTAAGTGG TGATAGACAT GTTAAACCCG TAGATTAA
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Protein sequence | MKRSLCCILI SAMGLTACGG SSDSSTESPG DITPPPVVPD GLVRCDTQFQ LDQTTTTSGL VFLTEPNYKS GQPAAIIATL QGKHVTEYQF NWTQTAGSKL ILKSSKSPVL AFTAHDTGSY KFEVTAVGRQ SSFTQSIEIN VEAGSDVQVS TRVDHQVTEG NSVSFRVDTP ETNPLSQISW CIAGGPALNV DISAPEKALF TAPNVDEDTL STLRVSAVIN GQSVTDDVHL LITKEGSITS QYFDERVAKT FAYNLSSPYK DDLQPCVYSN QLQQSCTISR LPLIGQLGGI NKQAILDRLL VSHHWMGENF EYFLENLDPN SDFATLLQSV TAIVISYDVR PSFYWVVTGA IYLDPNDLWL LAEERDTINE APDYRSSFGN DLNFLMPWRY VKDNNYTSYV VPRSVRADRT AEEMMPDLAS LLYHELAHAN DFFPRSVHTS LSGPTLLDDY FRRSDAKQLV SDQLTASYPL NSQEMANLAE VSFKGATANG TQKAYNAADI SSFFSPDRAS DYYAYSTTRE DAAMLFEEAL MSHRYSIQRD VAVTDKPENP TGSTINVDWG QRGRIGDASL ESRAAFVINQ MMPELNGAAL VNGLPEPIAM KQGLSWSENL MLSPSTQSQL NRTSASATFT PEIRLSGDRH VKPVD
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