| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1960 |
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| Symbol | |
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| ID | 5662354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2383910 |
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| End bp | 2385424 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641236557 |
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| Product | SpoVR family protein |
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| Protein accession | YP_001501817 |
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| Protein GI | 157961783 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2719] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATC AAAAAAAGAG AACACCATTA GACGATGGTC CAGATTGGAA CTTCGACTTA
TTACAGAGTT ATCTAACCGA AATAGAACGG GTTGCAGACT TTTATCGCTT AGATGCCTAC
CCGAATCAAA TTGAAGTCAT TACGGCAGAA CAGATGATGG ACGCCTATGC AGGTATAGGG
ATGCCGATCG GTTACACCCA CTGGTCTTTC GGTAAGCGTT TTATCGAGAC CGAGCAAGGT
TATAAACGCG GCCAAATGGG ATTAGCTTAT GAAATAGTCA TTAATTCAGA TCCTTGTATC
GCCTATTTAA TGGAAGAAAA CACTATTACG ATGCAAGCAC TCGTGATGGC CCATGCGAGT
TTCGGCCATA ATAGCTTTTT TAAAGGTAAT TACCTTTTTA AGACTTGGAC CGATGCCAGC
TCAATTATTG ACTATCTAGT ATTCGCCCGA AATTATATCA GTGAGTGCGA AGAGCTTTAT
GGGATTAATA AAGTTGAGAG TGTAATCGAC TCTTGTCATG CGCTTATGAG TTACGGCGTC
GATCGATATA AGCGCCCTAG TGAGATTTCA TTTAAAGAAG AGAAGATGCG CCAAAAAGAT
AGAGAGGCAT ACCTTCAGAG TCAAGTGAAT GAACTATGGC GTACGATTCC AGATCTCCCG
CAAGAGGAAG CAAAAGAAGA AACAATACGC TTTCCGTCTG AACCACAAGA AAACATTCTT
TACTTTATCG AAAAGAATGC ACCACTACTT GAGCCTTGGC AGCGTGAGAT CGTGCGAATC
GTGAGGAAAA TGGGCCAATA CTTCTATCCA CAAAAACAAA CCCAAGTAAT GAATGAGGGG
TGGGCGACAT TTTGGCACTA TACCATCCTC AATCACCTTT ATGATGAAGG CTTGGTGACA
GACCGATTTA TGCTTGAGTT TTTACAAAGT CATACTAACG TAGTAGCGCA ACCTAACTAT
AACAGTCCTC ATTACAGTGG TATTAACCCC TATGCTCTGG GCTTTAATAT GTTCGTTGAT
ATTAGACGGA TCTGTGAAAA CCCAACTGAC GAAGATAAGG AGTGGTTCCC GGAAATTGCC
GGAAGCGATT GGCTCACGAC GCTACACTTT GCTATGGAAA ACTTCAAAGA TGAAAGTTTT
ATTAGCCAAT ATTTGTCACC GAATATCATT AGGCAGTTTA AACTTTTCTC AGTATTAGAT
GATGACAGGA AAAACCATAT TAGTGTGTCG GCAATTCACG ATGAGGAGGG ATATAAAGAG
ATAAGACAGA AACTCTCCCA GCAATATAAC CTGTCAAACT TAGAGCCTAA TATTCAAGTA
CAGAATGTCG AGGTCACTGG AGATCGTTCT ATTACCTTAA GATATATACC TAACGCTAGG
ATCCCTCTTG CAGAAACTTG CCACGAAGTC GTCAAACATC TACATCGACT ATGGGGATTT
GATGTAAAGC TTGAGCAGTG TGATGAAAAT AAGTCGCATA TCATCGCATC TTGCCCAGAA
AAAACTGAAG CCTAA
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| Protein sequence | MDNQKKRTPL DDGPDWNFDL LQSYLTEIER VADFYRLDAY PNQIEVITAE QMMDAYAGIG
MPIGYTHWSF GKRFIETEQG YKRGQMGLAY EIVINSDPCI AYLMEENTIT MQALVMAHAS
FGHNSFFKGN YLFKTWTDAS SIIDYLVFAR NYISECEELY GINKVESVID SCHALMSYGV
DRYKRPSEIS FKEEKMRQKD REAYLQSQVN ELWRTIPDLP QEEAKEETIR FPSEPQENIL
YFIEKNAPLL EPWQREIVRI VRKMGQYFYP QKQTQVMNEG WATFWHYTIL NHLYDEGLVT
DRFMLEFLQS HTNVVAQPNY NSPHYSGINP YALGFNMFVD IRRICENPTD EDKEWFPEIA
GSDWLTTLHF AMENFKDESF ISQYLSPNII RQFKLFSVLD DDRKNHISVS AIHDEEGYKE
IRQKLSQQYN LSNLEPNIQV QNVEVTGDRS ITLRYIPNAR IPLAETCHEV VKHLHRLWGF
DVKLEQCDEN KSHIIASCPE KTEA
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