Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1958 |
Symbol | |
ID | 5662352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2382849 |
End bp | 2383397 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641236555 |
Product | hypothetical protein |
Protein accession | YP_001501815 |
Protein GI | 157961781 |
COG category | [S] Function unknown |
COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCAGTAG TATGTTCCTC GCGTAGACAG TTATTATTAG GATTAGGTGG CGTCGCAATG TTTTCTATGT TGCCATCTAA AGCTCAAGCA AGTCGTTCAA CTAAAGGGGT TAGGAGTCTA GGTTTTTATA ACCGCCATAC AGGTGAACGC GGGCAAGGAA GCTACTGGGT TGATGGCGAT TATCAAAGTG AAATTTTGAC CGACTTTAGT CAGGTACTTC GTGACCATCG ACAAAATGAA GCAGCGCCCA TGGATAAGCG TTTATTCGAT TTTGCTTATC AATTAAGAGA GTCGTTGAGC TTTAAAGAAG ACTTACATGT GATATCTGGT TATCGTTCGC CTAAAACCAA CGCTATGTTA GCTAATCGAA GTAACGGGGT TGCTAAGAAA AGTTATCATA TGAAAGGTAT GGCATTAGAT CTAGCCCTCC CTGGAGTCAA GCTTGCTCAT ATACGAGAAG CGGCATTGGA GTTAAAGCTT GGTGGCGTTG GTTATTACCC GAAATCAGGC TTTATCCACA TTGATACCGG CCCGGTAAGA TCTTGGTAA
|
Protein sequence | MSVVCSSRRQ LLLGLGGVAM FSMLPSKAQA SRSTKGVRSL GFYNRHTGER GQGSYWVDGD YQSEILTDFS QVLRDHRQNE AAPMDKRLFD FAYQLRESLS FKEDLHVISG YRSPKTNAML ANRSNGVAKK SYHMKGMALD LALPGVKLAH IREAALELKL GGVGYYPKSG FIHIDTGPVR SW
|
| |