| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1952 |
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| Symbol | |
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| ID | 5662346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2374251 |
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| End bp | 2375963 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236545 |
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| Product | peptidase S16 lon domain-containing protein |
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| Protein accession | YP_001501809 |
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| Protein GI | 157961775 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000193929 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCAA ACGTTATTCC TGCTTCGGCT CTTGTTCCAA TTTTTAACCT TCCAGCGGAA
CAGGCGTTCA TCCCTAGCGC AAAAGCAGAT TTGCTTGGAC AAGAGCGCAG TCTAGATGCA
TTTCGATTAC TCACAGCAAC CGATAATCAG CACATGTACT TGGCGGATTA CTTTGGTTGT
AACCGCAAAC ATATAATCGA CGCATTGGTT AAGGAGCAAG GCCAGTTTCC GGCGCTAAGC
TTAACCTTCA ATGAAGATAA GAGCACCGCT TGGGTTGAAC AGGATATTGC CACCTCAGCG
TCGCAACTTG CGACGAAAAC AGATCAATAT CAATATCTTT CAGGTTCAAT ACGAAAAGTC
GACCTAATCG GTCGCTATCA CAGCGAAACA CAAACCTATG AAGCGGGACT TTTGGCCAGC
TGTCATTATC TGTTTATCTG TGCCGATTCT TTGTGGAAGA AAGAAAACCT TTGGGATCTT
TTACTTGAAA TTCTCGACAA GCAAAGCTAC CAGGTACACT CACAGCTACC GCCTTTGGCG
TTAAAATGTA AAGTAATTCT CATTGGCTCG AGTAATCAGT ATGGCCACTG TTGGCTTGGC
GAGCCTAGCT TTTCGCGCCA CTTCCCGCTT CTTGGCGAAT TGATCAATGA GATGGACTTA
TCAGAGCACT CATCCATTGA CTACTGCCAA TGGCTAGCCC GTATATTATG TGAGTTGAAT
ATAAGCTTAA CTAGCTCGGC GCTACTATTG TTACTGCAGT ATAGCGCCAA GCTCGCCGAT
CACCAGCAGC GGTTAAGCTT AATGGCGACG AATCTAGAAC ACTTGTTAGC CCAAGCTAAA
GTCTATGCTC AAAGCACTGA GATCTCATCT CAAGCGCTAT TACACAGTAT TAGCATGACT
ACCCAGCGCC ACAATGCATC AGAGAGACTC TCTGAGCAGA ACTTTAATGA TCTATTTATC
AATTTACCTA CTCAAGATGA GATTGTTGGC CAGATAAACG GTTTAACCGT AATAGAAAAT
GCTGAATTTA GCTATGGAGA GCCTGCGCGT ATTACTGCAT CAGTTCACTA TGGTGATGGT
GAAGTTGCCG ATATTGAACG TAAGTCTGAA TTAGGCGGTA ATATTCACGC TAAAGGAATG
ATGATCCTAT CAGCATGTCT TTACCGAATC TTTGGTAAAG ATGCCCCACT CCATCTCAAT
GCCAATATCG TGTTTGAGCA ATCCTATCAA GAAATTGATG GCGATAGCGC CTCGCTCGCT
GAATATTGCT GTTTAATTTC GGCTATTTCA GAAAAACCTA TCAGACAAAG TTTAGCTGCC
ACTGGCGCTA TCGATCAATT TGGCAATGTA CAAGCCATTG GCGGCGTAAA CGAAAAAATT
GAGGGTTTCT TCAAACTCTG CAAGCGCCGA GGTCTAACGG GACAACAAGG AGTCATCATT
CCGTCCTCTA ACATGCAGCA GCTAAATTTG CACCAAGACG TTGTAGAAGC CATCAGAGCT
GGCCAGTTCA CCTTATATCA GGTTAAGCAT ATTGATGAAG CCGTCGAGAT TTTAATGCAA
ACCCAAGCAG GCATCGCAGA TGAGGATAAC CAGTTCCCCG ACGAGTCACT ATATGGCTTA
GTACAATCTC GTTTAGAAAA CTTGGCAGGT TATCAGGACG AAGAAAAGAG TCTTTTTGCA
AGACTCGTCG ATAAATTGAG ATTTTTTAGC TGA
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| Protein sequence | MNSNVIPASA LVPIFNLPAE QAFIPSAKAD LLGQERSLDA FRLLTATDNQ HMYLADYFGC
NRKHIIDALV KEQGQFPALS LTFNEDKSTA WVEQDIATSA SQLATKTDQY QYLSGSIRKV
DLIGRYHSET QTYEAGLLAS CHYLFICADS LWKKENLWDL LLEILDKQSY QVHSQLPPLA
LKCKVILIGS SNQYGHCWLG EPSFSRHFPL LGELINEMDL SEHSSIDYCQ WLARILCELN
ISLTSSALLL LLQYSAKLAD HQQRLSLMAT NLEHLLAQAK VYAQSTEISS QALLHSISMT
TQRHNASERL SEQNFNDLFI NLPTQDEIVG QINGLTVIEN AEFSYGEPAR ITASVHYGDG
EVADIERKSE LGGNIHAKGM MILSACLYRI FGKDAPLHLN ANIVFEQSYQ EIDGDSASLA
EYCCLISAIS EKPIRQSLAA TGAIDQFGNV QAIGGVNEKI EGFFKLCKRR GLTGQQGVII
PSSNMQQLNL HQDVVEAIRA GQFTLYQVKH IDEAVEILMQ TQAGIADEDN QFPDESLYGL
VQSRLENLAG YQDEEKSLFA RLVDKLRFFS
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