Gene Spea_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1930 
Symbol 
ID5662324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2342517 
End bp2343158 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content43% 
IMG OID641236519 
Productparaquat-inducible protein A 
Protein accessionYP_001501787 
Protein GI157961753 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.134385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATA ATCAGCCCGC GACGTTAGGC CAAGATATCG GTCTCACATC TTGCACAACA 
TGCCATAAAG TCACCTGTGC AAAATCGACT CTTTGTAGTC GCTGTAATGC GCCTCTAACC 
GTCAGAGACT ACTCAAGCGT ACAAAAGAGC TGGGCTTTGC TAATTACTGC AATGATTTTG 
CTGATACCCG CCAACGTTTA TCCAATTTCG ACACTAACAA ACCAGGGAAG AGTCACTCAA 
GATACTATCT TTTCTGGCAT CGCCCACCTA GTCAAAACTG ACATGATCCC CATCGCGATT 
ATTCTGTTTG TTGCCAGTAT TTTAGTCCCC ATCCTTAAGA TTGTGGGGTT AACAATTTAT 
TTATCGGCCA TTAGTTTTAA ATTACCTATC TCTAAAAAGA AGCTTATGAC AGGCTTTCAT 
ATTATTGAAT GGATAGGACG CTGGTCAATG CTTGACCTTT TCGTTATCTC ACTAACCGTT 
GCTGTCGTTA ATATGGGCCA GTTATTAGAC GCCAAACCAG CCCCTGCTGC CACAGCATTC 
GCCTTAGTTA TTTTACTCAC GCAGTTAGCT GCAAAAGTCA TAGATACCCG TTTACTCTGG 
GATAGATTGG AAGCCAAAGA TGACTCAAGT ACAAACGCCT AA
 
Protein sequence
MNDNQPATLG QDIGLTSCTT CHKVTCAKST LCSRCNAPLT VRDYSSVQKS WALLITAMIL 
LIPANVYPIS TLTNQGRVTQ DTIFSGIAHL VKTDMIPIAI ILFVASILVP ILKIVGLTIY 
LSAISFKLPI SKKKLMTGFH IIEWIGRWSM LDLFVISLTV AVVNMGQLLD AKPAPAATAF 
ALVILLTQLA AKVIDTRLLW DRLEAKDDSS TNA