| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1926 |
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| Symbol | |
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| ID | 5662320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2335962 |
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| End bp | 2336750 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236515 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_001501783 |
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| Protein GI | 157961749 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCTTATCG ATTCACATTG TCACTTAGAC CGTTTAAAAA TTGCCCCAGA TCAGGCTTCA
CTTCAAGAGG TTATCTCCGC TGCCAAAGCA CGGGATATTG CTTACTTTCT TTGTGTTAAC
GTAAGACAGC AAGGTTTTAT CGATATGAAG CAGAAAATGG CTGCATTCGA TGAAGTGTTC
CTATCTGCCG GAGTGCATCC GTTAGATGTA CAAGATGGCT TAAATATTCA AGAGGTTGAG
CAGTTTGCTC GTGATGAAAA AGTCGTTGCA ATCGGTGAAA CGGGTTTAGA TTATTTCTAC
GCCAATGAAA CAAAAGCATT ACAGCAGACC TGCTTTGAGC AGCAGATTGA TCTCGCGGTA
AAAGTGAATA AGCCACTTAT TATTCACACT CGTGATGCGC GTGAAGATAC CATTAATTTT
TTGAAGCGTG GTAAAGCGGA CACTGTCGGC GGTGTTCTGC ACTGTTTTAC CGAAGATTGG
GAAATGGCAA AGGCCGCAAT AGACTTAGGT TTCTACATTT CGGTTTCGGG CATTGTAACC
TTTAAAAACG CGGGTGAATT GCGTAACGTG ATAAGAAAAG TGCCTAAAGA TAGGTTACTG
GTGGAGACGG ATTCCCCCTA TCTAGCACCC GTTCCTCATC GAGGTAAAGA AAACCAACCT
GCTTTTGTAC GCGATGTCGC TGAGTTTGTG GCAGAGCTAA GAGGGGAGAA ATATCCTGAA
TTAGCGCAGT ACACAACTGA GAACTTCTTT ACTTTATTTA AAGATGCCGC AAGGTTGGCT
GGTCGCTGA
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| Protein sequence | MLIDSHCHLD RLKIAPDQAS LQEVISAAKA RDIAYFLCVN VRQQGFIDMK QKMAAFDEVF
LSAGVHPLDV QDGLNIQEVE QFARDEKVVA IGETGLDYFY ANETKALQQT CFEQQIDLAV
KVNKPLIIHT RDAREDTINF LKRGKADTVG GVLHCFTEDW EMAKAAIDLG FYISVSGIVT
FKNAGELRNV IRKVPKDRLL VETDSPYLAP VPHRGKENQP AFVRDVAEFV AELRGEKYPE
LAQYTTENFF TLFKDAARLA GR
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