Gene Spea_1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1919 
Symbol 
ID5662313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2331226 
End bp2331861 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content45% 
IMG OID641236508 
Producturidine kinase 
Protein accessionYP_001501776 
Protein GI157961742 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTA AAGATTGTGT TGTTATTGGT ATTGCGGGTG CTTCTGCATC GGGTAAGAGT 
CTTATCGCGA AAACGATTTA TGAAGAACTC TGTCGTGACT TAGGTACAGA TCAAATTGGC 
GTGATTGCAG AAGATGCATA TTATCGCGAC CAAGGTCACC TATCGATGGA CCAACGTGTT 
TTGACAAACT ATGACCACCC TAAAGCTTTG GACCACGAGT TATTATGTAG CCACTTGCGT 
GAGCTTAAAG CGGGCAATGC TGTCGACATT CCTGTCTATA GCTATACAGA ACACACTCGC 
ACTGACGAGA AAGTGACCCT GACTCCTAAA AAGGTCATTA TTCTTGAAGG GATCTTGTTA 
CTTACCGATC CTGCTTTGCG TAAAGAGATG GATGCGTCTG TATTTATGGA CACACCGCTC 
GATATCTGCT TTATGCGCAG ACTTTCTCGT GATGTGGCTG AGCGAGGCCG AACCATGCAG 
TCGGTAATGT CACAGTACAC TGAGACCGTT CGCCCAATGT TTTTGCAGTT CATTGAGCCA 
TCAAAGCAGT ACGCAGATAT CATTGTCCCG CGCGGTGGTA AAAACCGTAT CGCAACGGAT 
ATTTTAAAGG CGCGAATTCA GCACCTTTTA GCATAA
 
Protein sequence
MNSKDCVVIG IAGASASGKS LIAKTIYEEL CRDLGTDQIG VIAEDAYYRD QGHLSMDQRV 
LTNYDHPKAL DHELLCSHLR ELKAGNAVDI PVYSYTEHTR TDEKVTLTPK KVIILEGILL 
LTDPALRKEM DASVFMDTPL DICFMRRLSR DVAERGRTMQ SVMSQYTETV RPMFLQFIEP 
SKQYADIIVP RGGKNRIATD ILKARIQHLL A