| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1912 |
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| Symbol | |
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| ID | 5662306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2323131 |
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| End bp | 2324357 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236501 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001501769 |
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| Protein GI | 157961735 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.758085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAACT CATCCAATAG TCAAGCAATT AACAAGCAAG CATTTGGCGT CAGTTTAGCT
TTGCTGATCC CCATGCTATC TGCCATTGTC GCTATCACAC CGCTTGCTAT TGATATGTAC
CTGCCAGCTA TGGCGACGCT AGCAGCCAGT TTCAACACAG ATATCACCTT AGTACAGCAA
TCACTCAGTC TTTACTTAGG CGGTTATGCA TTAGGTATGC TCTGCTTCGG TCCCTTAGCC
GATAGGTTTG GCCGCAAGCG ATTAGTACTT ATGGGCTTAA CTGGATTTAT GCTCTGTAGT
CTCGCTCTCG CCTTTGTCAC CACTATTGAA GCATTCTTAA GCATCCGCTT TTTACAGGCG
TTTATCGGTG CTGCGGCAAC GGTTGTGGTG CCTGGCTATA TCAAAGAGCT TTACGGAAAG
AACACGGCTA AAGGCATGTC TTATGTCAGC CTGATCATGA TGCTCGCCCC GCTAATTGCC
CCTAGTATCG GCAGCCTAAT TTTAGAGCTC GGTGACTGGC ATCTTATCTT CTTTATCCTA
GCTTTCTACG CATTCATTTT ATTGCTGCTA GTGGGTCTTA AACTTAAGAT GCCTAGCGAT
ATAGACAAGA GCAGCCGAAG TACTCAGTCA TTTTTTGGCG CTTATGCGAC GGTATTTACA
AAAAAAGGCG TAAAGCTCAA TATCGCCAGC GGCGTACTCA CCTCATTTGC CTTTTTCTGT
TATCTAACGG CTTCGCCATT CGTTTATATG GAAGTGTTTG GCTTAGACAA ATCACTATTT
GCAATATTGT TTAGTACCAA TGTTGGCGCC TTAATGTTGG CCAACGTAGT CAACAGTAAG
ATCGTTGGTC GCTACGGCTC GAAGCGAATG CTTAAAGTTT CAACCTTCTT CGGAGTAATC
GCGGGTATCG CACTGCTGAG CGTTAATCTA CTCGGATTGA GCTACCACTT TACCGTGATC
ATGCTATTGC CGCTGATGGC CTGTCTAGGC GTTATGTCAG TCAATGCCGA TGCCATTGTA
CTGATGAAGT TTCAAAAAGA GACGGGAACC GCTACCGCAG TCATAGGCAC ATTACGTTTT
GGTTTTGGTG CATTAGCGGG CCCCTTGTTG GCACTGTTTT ATACAGGAAC TGCAGTACCC
TTTTCGGCTT TAATGCTTTC AGCTGTACTG TTAGTCGGTT TGTGCCAGTT TTTAAGTCGC
CATGAGCCCG CGGCGCTAGA GCAATAG
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| Protein sequence | MNNSSNSQAI NKQAFGVSLA LLIPMLSAIV AITPLAIDMY LPAMATLAAS FNTDITLVQQ
SLSLYLGGYA LGMLCFGPLA DRFGRKRLVL MGLTGFMLCS LALAFVTTIE AFLSIRFLQA
FIGAAATVVV PGYIKELYGK NTAKGMSYVS LIMMLAPLIA PSIGSLILEL GDWHLIFFIL
AFYAFILLLL VGLKLKMPSD IDKSSRSTQS FFGAYATVFT KKGVKLNIAS GVLTSFAFFC
YLTASPFVYM EVFGLDKSLF AILFSTNVGA LMLANVVNSK IVGRYGSKRM LKVSTFFGVI
AGIALLSVNL LGLSYHFTVI MLLPLMACLG VMSVNADAIV LMKFQKETGT ATAVIGTLRF
GFGALAGPLL ALFYTGTAVP FSALMLSAVL LVGLCQFLSR HEPAALEQ
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