| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1908 |
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| Symbol | ushA |
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| ID | 5662302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2318021 |
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| End bp | 2319739 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236497 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_001501765 |
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| Protein GI | 157961731 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00316066 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA TTTTACTAAA AGGACTCGTC ACTACGGCTG TTGTCACTGC ATTAACGGCT
TGTGGTAGCG ATAATAATGA TAGTGATGGT TCTATAAGCA CATTACCTAT GACATGTGTT
GAAGCGGGTG ATGCTTGTAC TAAGTTTACT GTATTACACA CTAATGATAA CCATGGCCGT
TTTTTTGAAA ACAAATATGG CGAATACGGC ATGGCAGCTC GTAAGACACT GATCGAACAG
ATCCGTGCTG AAGTTGAAGC AAATGGTGGC GAGTCAATCT TACTGTCTGG CGGTGATGTT
AACACTGGCG TTCCAGAATC TGATTTACAA GATGCGCGTC CAGATTTTAT TGGTATGAAT
TTGATTGGTT ATGATGCTAT GGCTGTCGGT AATCATGAAT TTGATAATCC CTTATCAATA
GTTAATATGC AGCGCGAACT TGCCGAATTC CCAATGCTAG CTGCAAACAT ATATGACAAG
GTATCCGGTG AGCGCTATTT TGATGCCTAT AAAGTGTTTG ATGTTAATGG GATCCGTATT
GCAGTTGTCG GTTTAACAAC TGAAGATACA GCTAAGATTG CTAACCCAGA GTTTGTAAGT
GGGCTTGAGT TTACCGATCC AAAAGAAGAG TTGAAGAAGG TAATTAAAGA GATCAATGAT
GCTGATAAAG CTGACTTGAT TTTCGCAACG ACCCATATGG GGCACTACGC TGATGGTGCT
AACGGAAATA ATGCGCCAGG TGATGTTGCA CTTGCTCGTG CAATGGCAGC GGGAGAGTTA
GCAGCCGTCA TTGGTGGACA CTCGCAAAAC CCTGTATGTA TGGAAGGGAA TGAATACGAT
TCAGAGTTTA CTCCCGGTGG TGAATGTAAG CCAGATGTTC AGAACGGTAC ATTTATCATG
CAAGCTCATG AGTGGGGTAA GTATGTTGGT CAAGCGAACT TTGAATACTT CAATGATAAT
CTACACCTAG CGAGTTACAA GCTGATCCCT GTAAACCTAA AAGAGAAGAA CGAAGCGGGC
GAACGTGTAT TAATCGGTGA ACCTATCAAA CCAGATGCAA CTGTGCTGGA AATTTTGCAG
CAGTATCAAG ATAAAGGGCA GGAAGGACTA TCTGAAGTTA TCGGTACAAC AGATGGAAAA
CTTGAAGGAG ATCGTGGTGT TGTACGTACT CAGCAAACAA ATTTAGGTCG ACTGATTGCT
GAAGCACAGC GTAGTAAAGT GGATGCTGAC TTTGCGGTAA TGAATTCAGG TGGGGTACGT
GATTCTATCG AAGCCGGTGA GATCACCTAT AAAGATGTTC TTACTGTTCA GCCATTTGGC
AACTCCATTA CTAAGAGTAC ATTGAGTGGG GCTGAAATTA CAGACTACCT GAACGTCGTT
GCGACTGTAG ATATCGGTGT TGAGGGCTCT GGTGCATACC CACAGCTTGC GGGTATTAAG
ATGGAAGTTG ATTGTGAAGC GACAACAGTT GTTATCAACG ACATAAATGG TAAAGGTTAT
GATGCTGACA CAATGTACAG CTTTACTGTT CCTAGTTACA ACGCCGCTGG CGGCGATGGC
TACCCAGTAC TGACTCCTGT AATGACAGGA TATGTGGACG CAGAAGTAAT GTATACCTTC
ATCAAAGACA TTGGTGATAT CAAGATCGCA GAATTCGCAC CAGTAGCAGG TGATGTGCAA
TTCCTAAACA GTAAGAGCAC TATGGCTTGT CAGCTATAA
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| Protein sequence | MNKILLKGLV TTAVVTALTA CGSDNNDSDG SISTLPMTCV EAGDACTKFT VLHTNDNHGR
FFENKYGEYG MAARKTLIEQ IRAEVEANGG ESILLSGGDV NTGVPESDLQ DARPDFIGMN
LIGYDAMAVG NHEFDNPLSI VNMQRELAEF PMLAANIYDK VSGERYFDAY KVFDVNGIRI
AVVGLTTEDT AKIANPEFVS GLEFTDPKEE LKKVIKEIND ADKADLIFAT THMGHYADGA
NGNNAPGDVA LARAMAAGEL AAVIGGHSQN PVCMEGNEYD SEFTPGGECK PDVQNGTFIM
QAHEWGKYVG QANFEYFNDN LHLASYKLIP VNLKEKNEAG ERVLIGEPIK PDATVLEILQ
QYQDKGQEGL SEVIGTTDGK LEGDRGVVRT QQTNLGRLIA EAQRSKVDAD FAVMNSGGVR
DSIEAGEITY KDVLTVQPFG NSITKSTLSG AEITDYLNVV ATVDIGVEGS GAYPQLAGIK
MEVDCEATTV VINDINGKGY DADTMYSFTV PSYNAAGGDG YPVLTPVMTG YVDAEVMYTF
IKDIGDIKIA EFAPVAGDVQ FLNSKSTMAC QL
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