| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1875 |
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| Symbol | |
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| ID | 5662270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2286427 |
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| End bp | 2287326 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236465 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001501733 |
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| Protein GI | 157961699 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATTG ATGTTGATGC TTTTAAAGTG CTGCAAGTGT TAGTTGAAGA AGGCAGCTTT
GCTAAGGCAG CCGAGCGCCT TCACAAGGCA CAATCAGCGG TGAGCTACCA AGTTAAAAAG
CTTGAGCAGC ATCTAGGTGT AAACCTTTTT TGTCGGGATC AGTATCGAGC AGAGTTAACC
CCTGAGGGAA AAGTTATCTT GGCCGAGGGA CAAAGGTTAC TGCAGTATCT GGCAAATATT
GAACATCTAG CCAGCCGATT TAGCGAAGGC TGGGAGCCTA AGCTTGAAAT TATCATCGAC
GGGGCATTGC CGATGAAACC TATTATGAGA GCATTGAAGC GACTTTCTGA GCAACAGATC
CCTACTAAAG TGCAGCTTAA TATGGAGTTT CTTGGAGGCG TTCAAGATAG GTTCGAGCGA
GACAGTGCCG ATCTTATGTT GGTAAAAGAC TATCGTACTG GCCCAAGTTA CCGTCCTCAG
GCTTTACCGC CGATCACCAG TGTTTTAGTC GTCAGCGCAG AGCATCCGCT TGCTCAAGAA
AAGCGGCTCA GTTTATTTGA GTTACAGCAA CATGTGGAGC TAACCATTGA AGACTCATCG
CCTGATAAAC ACTACCGTGA CGAGTTACAG TTTGGTGGCG ATAAGGTGTT CTACCTTTCA
GGTTTTATCA TGAAGAAGAA TGCACTTTTG ATGGGGCTAG GTTTTGGCTG GATGCCAGAC
TTTCTAATCG AAAAAGAGCT TAGTAGTGGC GAATTAGTCG AAGTGGACTT TAGCGGAGGT
AATCGCTATA GCTTCACTCC TCAACTGGTT TCAACCATGG AGCGGCCTCT TGGGCGAGCG
GGACGTTTGT TCACTGAATT GGTAATGGAA GAGTGTAGGA GTGAGACTAA CTTAGTTTAA
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| Protein sequence | MRIDVDAFKV LQVLVEEGSF AKAAERLHKA QSAVSYQVKK LEQHLGVNLF CRDQYRAELT
PEGKVILAEG QRLLQYLANI EHLASRFSEG WEPKLEIIID GALPMKPIMR ALKRLSEQQI
PTKVQLNMEF LGGVQDRFER DSADLMLVKD YRTGPSYRPQ ALPPITSVLV VSAEHPLAQE
KRLSLFELQQ HVELTIEDSS PDKHYRDELQ FGGDKVFYLS GFIMKKNALL MGLGFGWMPD
FLIEKELSSG ELVEVDFSGG NRYSFTPQLV STMERPLGRA GRLFTELVME ECRSETNLV
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