| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1874 |
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| Symbol | |
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| ID | 5662269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2285111 |
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| End bp | 2286271 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236464 |
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| Product | homogentisate 12-dioxygenase |
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| Protein accession | YP_001501732 |
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| Protein GI | 157961698 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCTT ATGTGAAGCA AGGTATTGTG CCCGCTAAGC GCCATATCAC CTTTAAAAAA
GACAATGGAG AGCTCTACCG TGAAGAGCTA TTCTCCACCC ATGGCTTTTC CAACATCTAT
TCCAATAAGT ACCATCACAA CATGCCAACC AAGGCATTAG CAGTGAGCCC CTATAGCTTG
TCTCATGGCG AAGACTGGCA AGACTCATTA GTACAAAACT ATAAGTTAGA TACCAAGCAA
GCTGATTGCG GTGGCAACTT TTTTAGTAGC CGTAACAAGA TATTCTTTAA TAATGATGTC
GCCATGTACA CGGCAAAGGT CAGCGAAGAG TGTGATGAAT TCTACCGTAA CGCCTACGCA
GATGAAGTAG TGTTCGTTCA CGAGGGCCAA GGCACCCTTT ACAGTGAATA CGGTGCACTT
GCAGTGAAAA AGTGGGACTA CTTAGTGATC CCTCGCGGCA CCACTTACCA GCTAAAATTT
GATGACTATA GCAATGTCAG ATTATTTGTT ATCGAGTCTT CATCCATGGT GGAAGTACCA
AAGCATTTTC GTAATGAATA TGGCCAGATG CTTGAATCAG CTCCTTATTG CGAACGTGAC
ATTCGTACAC CTGAGCTAGA AGACGCCATC GTAGAGAAAG GCGACTTCCC GCTTATCTGC
AAATTTGGCG ATAAGTATCA ACTGACATCA CTTGAGTGGC ACCCATATGA TTTAGTGGGC
TGGGACGGCT GTGTGTACCC TTGGGCCTTC AATATTCAAG AGTACGCACC TAAGGTAGGC
AAAATCCACC TACCGCCGTC TGACCACATA GTGTTTAGCG CTCACAACTT TGTGATCTGT
AACTTTGTGC CGCGCCCCTA TGACTTCCAT CCAGAATCGA TACCCGCACC TTACTATCAC
AGCAATATCG ACAGTGACGA AGTGCTGTAT TACGTCGACG GTGACTTTAT GAGCCGTACG
GGCATAGAAG CAGGCTTCAT GACCCTACAC CAAAAAGGTG TGCCTCACGG GCCGCAACCG
GGCCGCACGG AGGCCTCAAT TGGCAAAACA GAAACTTACG AATACGCAGT GATGGTCGAT
ACCTTCGCCC CACTGAAACT AACGGAACAT GTAAAGCATT GCATGAGTAA CGACTACAAC
CGCTCTTGGA TTGAAAGCTA A
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| Protein sequence | MPSYVKQGIV PAKRHITFKK DNGELYREEL FSTHGFSNIY SNKYHHNMPT KALAVSPYSL
SHGEDWQDSL VQNYKLDTKQ ADCGGNFFSS RNKIFFNNDV AMYTAKVSEE CDEFYRNAYA
DEVVFVHEGQ GTLYSEYGAL AVKKWDYLVI PRGTTYQLKF DDYSNVRLFV IESSSMVEVP
KHFRNEYGQM LESAPYCERD IRTPELEDAI VEKGDFPLIC KFGDKYQLTS LEWHPYDLVG
WDGCVYPWAF NIQEYAPKVG KIHLPPSDHI VFSAHNFVIC NFVPRPYDFH PESIPAPYYH
SNIDSDEVLY YVDGDFMSRT GIEAGFMTLH QKGVPHGPQP GRTEASIGKT ETYEYAVMVD
TFAPLKLTEH VKHCMSNDYN RSWIES
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