Gene Spea_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1870 
Symbol 
ID5662265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2278702 
End bp2279517 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content36% 
IMG OID641236460 
Producthypothetical protein 
Protein accessionYP_001501728 
Protein GI157961694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.745449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACTTT GTGAAACTTC AAAAGATTAT GAGTTACTAA CCCAAAAGAT ATATAAAGCT 
ATATTGGAGT CAGAAGGCGT CGAAAATCTT GAAGTAAAGC ATGATGAGAA AGTTCGAGGT
AAGTCTGGAG TAGAGCATCA AATTGATGTT TTTTGGGAGT ATAAGTATGC AGGAGTGAGC
CATAAGGTAC TTATTGAATG TAAGTATTAT TCTAAAGCGG TCTCTCTTAT TCATGCTAGA
AATATGCTCG GGCTATTAAA TGACATTCCA AATAGTCAAG GCTTACTGGT AACGACCCAA
GGATTTCAAT CTGGCGTTAT CGACTTCTGC AACCACTATG AAATAAAATT GAAGCGAATT
AGACCACCTA AAGGTTCTGA TTGGGATGGC TGCATTCAAA TTGTGAATGT CAATGGTGTA
TTATATCAAA ATCAATATTT GAACTTAGGT TTTTCCTTTG ATGCTAGAGA TGAGGGAACG
AAGGCTTTCG TTGAGAACAA CGGGAAGGAA ATATCATTTA ATGCATATGA TGTGACCGTT
GAAGACGAAG GTGAAAAATA TTTTATTGGT AAGTGGTTAG ATAAAAAAAT TGTTTCTAAT
CTCGCTGAAT TGGGCACACA AAGAGAGGAA GTAATCGAAC CTGAGGACGC ACATGTCATT
TTATCTTCCG GTGATAAATT AAAACTACGT AATGTAAAAG TTCTTTGGGA ACTAACAAAG
CAAGATTTAT CCTTATCAGT CGACGCTATG GATTTCGTAC ATGCTGTTTT AGAAGATTTT
GGTTCAGGTG AAGTGGAATA CACTTTAAAC AAATAA
 
Protein sequence
MELCETSKDY ELLTQKIYKA ILESEGVENL EVKHDEKVRG KSGVEHQIDV FWEYKYAGVS 
HKVLIECKYY SKAVSLIHAR NMLGLLNDIP NSQGLLVTTQ GFQSGVIDFC NHYEIKLKRI
RPPKGSDWDG CIQIVNVNGV LYQNQYLNLG FSFDARDEGT KAFVENNGKE ISFNAYDVTV
EDEGEKYFIG KWLDKKIVSN LAELGTQREE VIEPEDAHVI LSSGDKLKLR NVKVLWELTK
QDLSLSVDAM DFVHAVLEDF GSGEVEYTLN K