Gene Spea_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1869 
Symbol 
ID5662264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2276940 
End bp2277560 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content47% 
IMG OID641236459 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001501727 
Protein GI157961693 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.051717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGATT TAACTTTATT AGCTGTATTT CTTCCGACCT TCTTTTTTGT CTCTATCACG 
CCAGGCATGT GCATGACGTT AGCGATGACG CTAGGCATGA GTATTGGATT TCGCCGCACC 
CTGTGGATGA TGCTGGGCGA GCTTGTAGGT GTTGCCTTAG TGGCGGTCGC TGCGGTGATG 
GGGGTTGCTA GCATCATGCT AAATTACCCG GAACTGTTTT CCGTGCTCAA ATGGGTAGGC 
GGGATCTACT TATGCTATAT CGGTGTCAAT ATGTGGCGTT CGAAAGGCAA AATGGCCATT 
GTCGAAGGTC AGCAAATATC TCGCGTCAGT AACCTTGAAC TTATCTCTCA AGGTTTTTTC 
ACAGCAATCG CCAATCCTAA GGGGTGGGCG TTTATGGTCT CTTTATTGCC GCCATTTATT 
AGCGTTGAGC GTGATGTGGC TCCACAGCTT ATCACCCTTG TCAGTATCAT TCTTTTCACC 
GAGTTCATCA GTATGATGGC TTATGCCGCT GGTGGTAAGA GTCTGAGAAT ATTCTTAAGC 
CGTGGCGATA ATATCAAGTG GATGAACCGT ATTGCTGGCA GCCTAATGCT AGGTGTAGGA 
TTCTGGCTAG CAATGGGCTA A
 
Protein sequence
MPDLTLLAVF LPTFFFVSIT PGMCMTLAMT LGMSIGFRRT LWMMLGELVG VALVAVAAVM 
GVASIMLNYP ELFSVLKWVG GIYLCYIGVN MWRSKGKMAI VEGQQISRVS NLELISQGFF 
TAIANPKGWA FMVSLLPPFI SVERDVAPQL ITLVSIILFT EFISMMAYAA GGKSLRIFLS 
RGDNIKWMNR IAGSLMLGVG FWLAMG