| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1861 |
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| Symbol | |
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| ID | 5662256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2266076 |
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| End bp | 2267017 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236451 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001501719 |
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| Protein GI | 157961685 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCCA CAACATCCCA AAACGCTGCC TCTTCATTTA AGGGCAACGC ACTTGCTGCT
TTCTCGTTTC TATTATGGGG CTTGATGCCG CTCTACTATC ATTTTTTGCC GAATGCCAAT
ATCAATGAGT TACTAGCATT TAGGATCCTG TTCTCTGTGC CTTTTATGGC ACTGGTGTTT
GTGCTGATGG GACGCCGTTT TCCCTCAATT GCGACTCTTA AAGCCGACAA GAGATCTGTG
CTGCTATGCG GGCTAGCCTC GCTTATCATG TGCGTGTCTT GGTACAGCTT TACCTGGGCT
ATCACTCATG GACAAGTGCT TGCGGCTAGC TTAGGCTTTT TCATTAACCC ACTGTTTGCT
ATTGGTTTAG GCGTGTTATT TCTTGGTGAT AAGCTCAGTG CAGCACAAAA AATGGCAGTG
GTATTGGGCA CCTGTGGCAT AAGTTACATG GTTTATAGCT ATGGTGAACT GCCTTGGCTT
GCACTCAGCA TGGGCAGCTT TTTTGCACTC TACGGCCTTT GTAAAAAGTT TATCCGCTTC
GACTCGCTCA CCTCAGTAAC AGTAGAGGCG CTTTTATTGA TGCCTGTTGC TGCAGTCTAT
TTACTGTGGC TGTGGAGCTC AGATCAAAGC GTGGCGATAT CGGCTGCACT ATCAGGGCAG
ACATCGGTAT TGCTGCTCTA TATTGGCTCA GCGCCTGTGA CCTTAATGCC TTTGGTCTTC
TTTGCGCTGG CCATCAGGGC GACAAGCTTA TCTATGATAG GGCTAATGCA ATATATCGAG
CCTAGTTTGC AATTCTTGCT GGCTGTGATT GTATTTAATG AAGTGTTTGA TCAAGTAAAA
GCGGTAAGCT TCGCCTTGAT CTGGACCGGA CTACTGTTAT GTTCATTAGA AGCGCTGCCC
GCACTAAGAC ACAAGTATCG AGCAAGCCGA CATCCTAGTT AG
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| Protein sequence | MQSTTSQNAA SSFKGNALAA FSFLLWGLMP LYYHFLPNAN INELLAFRIL FSVPFMALVF
VLMGRRFPSI ATLKADKRSV LLCGLASLIM CVSWYSFTWA ITHGQVLAAS LGFFINPLFA
IGLGVLFLGD KLSAAQKMAV VLGTCGISYM VYSYGELPWL ALSMGSFFAL YGLCKKFIRF
DSLTSVTVEA LLLMPVAAVY LLWLWSSDQS VAISAALSGQ TSVLLLYIGS APVTLMPLVF
FALAIRATSL SMIGLMQYIE PSLQFLLAVI VFNEVFDQVK AVSFALIWTG LLLCSLEALP
ALRHKYRASR HPS
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