Gene Spea_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1854 
Symbol 
ID5662249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2256000 
End bp2256611 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content47% 
IMG OID641236444 
Producthypothetical protein 
Protein accessionYP_001501712 
Protein GI157961678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.173469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCTCAT TACCCTACTC TCAATCTTGT GAAAATAACA GAACTGCCAT CGCCGCCGTG 
TTAGAGCGCA GCTTTGCCCA AGTCAGACAT GTGCTAGAGG TTGGCAGTGG TACGGGTCAG 
CATGCGGTAC ACTTTGCCAA GTTGCTACCA CACCTTATCT GGCAAACCAG CGATCAACTC 
GACTACCATG ATGGGATCAA TGCTTGGATA GCCGCAGAGC CCAGCACTAA TTTACGTGCG 
CCGCTGGTAC TTGATGTCAC TAAGCCATGG CCGATAACAC AGTTCGAACC TGCAGTTGTT 
GATGGTATTT TTAGTGCTAA TACTTTACAT ATCATGTCGA AAGGGATGGT CGAGGCTTTC 
TTTGCAGGGA TTGGAAAACA CTTAGCTAAG GGCGGCCATT TCTGCGTCTA TGGCCCATTT 
AACTATAATG GGGAATATAC TAGCGATAGC AATCGTAATT TCGACCAATG GTTACTGCAG 
CAAAACCCAC AAAGTGCCAT CCGTGATATC GAATGGATAA GTGAGCTTGC TGCGACGCAA 
GGCTTGGAGT TAATCGAAGA TCACCCCATG CCTGCCAATA ACCGCTTGCT TCATTTCGAG 
AAAAAACGCT AA
 
Protein sequence
MSSLPYSQSC ENNRTAIAAV LERSFAQVRH VLEVGSGTGQ HAVHFAKLLP HLIWQTSDQL 
DYHDGINAWI AAEPSTNLRA PLVLDVTKPW PITQFEPAVV DGIFSANTLH IMSKGMVEAF 
FAGIGKHLAK GGHFCVYGPF NYNGEYTSDS NRNFDQWLLQ QNPQSAIRDI EWISELAATQ 
GLELIEDHPM PANNRLLHFE KKR