Gene Spea_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1845 
Symbol 
ID5662240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2244402 
End bp2245556 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content43% 
IMG OID641236435 
Producthypothetical protein 
Protein accessionYP_001501703 
Protein GI157961669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.940266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC AAATGCGTAT AGCAAAATAT TTTTCATCAT CAGAGTCTGA GCTTAACCAA 
CTCTGGACTA GTTTGCTTAA TCGAAATCTA ACCACACAGG ATGATTTTCC TGAGATAGAA
GATAGCAGCC CTTGGTATAT CCAGCTTATG CAATCAGTTG CCGCTTGGGT AGCATCACTG
TTTATCCTTG CCTTTAGCAT CAGCTTTTTT AATCTCTTCT TTGATGATTT AGACACAGGT
TTTGCGACGG CTGTGGGGGG ATTTTATAGC GTATTCGCGC TGGTTATCTA TCGAAGCATA
TCTGATAAGC AGCTGTTTTT AAATCAGATG GCCTTTGCCT TGAGTTTATG TGGGCTGCTG
TCCCTTGGCT ACGGCATGAC AGATTGGTTT AGTCTGGTTC ATAACAAGGA GATTGGCTTA
GCATGGTATG TCACTTTTGG GGCTATCTTA TTACTTCAAT GGTATTTAAT TGAGCACACT
AGCCATCAAT ACGCGATGAG CTTTGGCATA ATTAGCTGTC TAATTGGTGC AAGTTATGAG
CTAGGACTGC TGGAGCTTAT GCCAACCCTT ATTATGATAT TGTTTGCTGG AGTCTGGTTG
AATCATAGTA AAACAGGTAA GCACTTTGCC GCTATGGGGG CATTTGGCTA TATGCTTGCA
ATATGGCTGG TGCTAATTCA GCTGCCGTTG CTGATCAATC AATCGGACTT CTTTGGTCGA
GATGAGTTTC CACTCGTCGC AGAATGGGCC AATGTGCTAT CTGTTATTTC AACCTTTATT
ATCTCGGTTG TGTTATTAAG AAAGATCTTA CAACCTCTAT CCGTTTCTCT AACCAGTAAA
CTGGGCTTGA GTATCAGTGT TGCCATGCTT GTATTAGCAG GGCTTTCTAT GGTGATGACT
GGCTTGTCGG CTTCTCTGCT GGTCTTGCTT ATCGGCTTTT ACGTTAGGGA GAGGCTGATT
ACTGCATTAG GGCTTATGGG GATCCTCAGC TTTATTGCCT GGTATTACTA CAATTTGCAA
CTGCCGCTAC TCGACAAGTC CATTTGGTTA GCCGCGCTAG GTGTATTGCT GCTTTTGGCG
AAGTTATTGC TGAATAAATT GCAGCCAGCC AAAATACAAC AGAGCGAGCA GGGGAAGGAT
CGTGATGAAG TTTAA
 
Protein sequence
MKNQMRIAKY FSSSESELNQ LWTSLLNRNL TTQDDFPEIE DSSPWYIQLM QSVAAWVASL 
FILAFSISFF NLFFDDLDTG FATAVGGFYS VFALVIYRSI SDKQLFLNQM AFALSLCGLL
SLGYGMTDWF SLVHNKEIGL AWYVTFGAIL LLQWYLIEHT SHQYAMSFGI ISCLIGASYE
LGLLELMPTL IMILFAGVWL NHSKTGKHFA AMGAFGYMLA IWLVLIQLPL LINQSDFFGR
DEFPLVAEWA NVLSVISTFI ISVVLLRKIL QPLSVSLTSK LGLSISVAML VLAGLSMVMT
GLSASLLVLL IGFYVRERLI TALGLMGILS FIAWYYYNLQ LPLLDKSIWL AALGVLLLLA
KLLLNKLQPA KIQQSEQGKD RDEV