| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1841 |
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| Symbol | |
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| ID | 5662236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2239346 |
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| End bp | 2240659 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236431 |
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| Product | hypothetical protein |
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| Protein accession | YP_001501699 |
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| Protein GI | 157961665 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.521944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA ATAGAGCGCC GGTGAAGCTA GAAGCACAGT TCAACAAGGG CTCAATGAGT
CCGTCTCGTC TACCTACCTC AGTATATTGG GAAGGAATTA AGCAAGCTTT TGACGAGATG
CGGCATCATA AACTCCGTAC GTCATTAACC TTACTGGGGA TGATATTCGG CGTAGGCGCA
GTTATTGCTA TGCTTAGTGT GGGTGAGGGG GCTGAGCGTG AAGCGCTTAA GATGATTGAA
TCTATGGGAG TGAAAAACCT AGTCGTCAAT GCTCGCAGCG CCGAAGGCGA TGCACTTAAG
TCGATACGAG AGCACAGCAT CGGTCTCAGT ATTAGAGACG TAGAAAGTGC TCGTGATACC
TTGCCATTTA TAGACAATTG GAGCGCTGAG AAAAACGTAA AAGTGTTCAG CTTGTTTAGC
TTAAAAGGCC GCAGCGACGC ACAAGTCGTA GGTGTGACGC CAAGTTATTT TGACTTGAGT
TCTTTACCTT TGGGAGAGGG ACGAACGTTC AATGACAAGG ATGAAGACTA TTATCAACAA
GTCGCGGTAC TCGGCCCTGA GGCTGCTAGG AGCTTATTCC CTCAAGGCAG TGCCATTGGT
AATTTGGTTA AGGTTAATCA TCAGTGGTTT ACCGTTGTTG GCGTGTTGTC AGAAAAAGAG
AGCAGCAAGT CTAGCATTCA AGGAGTAAAG CTTGGCGGCG AGCGTAATCA AGTGTTTATT
CCTTTGACCA CAGCGCTCAA AAAAATGCAG TTTAACAGTT TAGAGAGTGA GCTCGATGCA
TTTAAATTGG CATTGGCCGA CGGTGTAGAG CCCTCGCTTG CAGCAAAAAG CTTACAGCAT
CTGCTAAATC GACGTCATGG CGGTGAAAAA GACTTTGATG TGGTGGTGCC TGCCGACTTA
CTGGCCCAGC ACCAAAAAAC CCAGCAGATC TTCAACATTG TAATGGCCTG TGTCGCTGGG
ATTTCATTAT TGGTTGGCGG GATCGGCATC ATGAACATCA TGTTAGCGAC GATTTTAGAA
CGTACCGGTG AAATTGGTTT GCTCAGGGCT CTGGGGGCAA AGCGTAAGGA TATTGCCCGT
CAATTCTTGA TTGAGAGCAT CGCGATATCG GCCACAGGTG GCATCATAGG TATTGGTGTC
GGATTGCTAT TGGCCTTGAT TATCTCCTCA GCTGCAGGCT GGCCTGTAGC ATGGTCACCC
TTTGCCATCT TGTTGGCCCT TGGAGTTTGT ATGACAATCG GTGTGGGATT TGGTCTGTAT
CCTGCCAACA AAGCCGCCAA ACTTGACCCG ATAGTGGCTC TGCAACGGGA CTAG
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| Protein sequence | MTANRAPVKL EAQFNKGSMS PSRLPTSVYW EGIKQAFDEM RHHKLRTSLT LLGMIFGVGA
VIAMLSVGEG AEREALKMIE SMGVKNLVVN ARSAEGDALK SIREHSIGLS IRDVESARDT
LPFIDNWSAE KNVKVFSLFS LKGRSDAQVV GVTPSYFDLS SLPLGEGRTF NDKDEDYYQQ
VAVLGPEAAR SLFPQGSAIG NLVKVNHQWF TVVGVLSEKE SSKSSIQGVK LGGERNQVFI
PLTTALKKMQ FNSLESELDA FKLALADGVE PSLAAKSLQH LLNRRHGGEK DFDVVVPADL
LAQHQKTQQI FNIVMACVAG ISLLVGGIGI MNIMLATILE RTGEIGLLRA LGAKRKDIAR
QFLIESIAIS ATGGIIGIGV GLLLALIISS AAGWPVAWSP FAILLALGVC MTIGVGFGLY
PANKAAKLDP IVALQRD
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