Gene Spea_1833 details

Gene Information

• Locus tag: Spea_1833
• ID: 5662228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 2232132
• End bp: 2232680
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641236423
• Product: nitroreductase
• Protein accession: YP_001501691
• Protein GI: 157961657
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0967243
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGACGCAT TAGAATTATT GTTAACTCGC CAATCTACCC CAAGACTCAT CGCACCAGCA 
CCTAATCCAC AGCAACTGCA AACTATCTTA GACGCAGCAA CTCGTGCACC AGATCATGCG 
GGTCTGACAC CTTGGGAATT TATTATTGCC GAGGAGGATG GCCTAGCTCG ACTTGGGGAG 
GTTTTTGTCA AAGCATTGCA GGCGAAAGGA GCCGATGAAG ACTTAATTGC TAAGGCAAAG 
AATATGCCCC TAAGGGCGCC AATGGTGATT ACTGTTGTGG CTAAGGTAAT TGAACACCCA 
AAAGTTCCCG CGCTAGAGCA ACAACTTGCA GCAGGATGCG CTGTGATGGC AATGCAACAA 
GCGGCCTTTG CTCAAGGCTT AGGCGGTATA TGGCGTACAG GAGAGTTGGC CTTCGATGCT 
AACGTGTATC AATTACTTGG GTTACAAAGT ACCGATCAAA TTGTAGGGTT TCTCTACCTA 
GGCACTCCAG CGATAAAAGC CCCGACCAAA ACACTTAAAG ATGGCAAGAG CTTCGCTCGA 
TATTTATAG 

 

Protein sequence

MDALELLLTR QSTPRLIAPA PNPQQLQTIL DAATRAPDHA GLTPWEFIIA EEDGLARLGE 
VFVKALQAKG ADEDLIAKAK NMPLRAPMVI TVVAKVIEHP KVPALEQQLA AGCAVMAMQQ 
AAFAQGLGGI WRTGELAFDA NVYQLLGLQS TDQIVGFLYL GTPAIKAPTK TLKDGKSFAR 
YL