| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1828 |
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| Symbol | |
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| ID | 5662223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2226691 |
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| End bp | 2228829 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236418 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001501686 |
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| Protein GI | 157961652 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000226653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACTC TAAAAACTTA TTCGCCAGTC GCCCTCGCGA TTATTGCTGC TATTTCCTCT
CCCAATGCAC TTGCTAATGA GCTGGGTTCA CCTGTGAGCG ATGACATCGA AGTCATGGTG
GTCACTTCCG ACTTTCGCGG CAGCGCACTC GAAAAAATGC CATCGAGTGT CACAGTTATC
GATCAGCAGC AAATTGAAGA TGAGGGAGCG CAGCACTTCG AAGATATCCT CAATAATATC
GCCAACTTTA ACTGGTCTGG TGGTAGCTCT CGGCCTAAGT ATTTCCAAAT TCGTGGTGTC
GGCGAGCAGG AAGAGTACCA AGGCGCACCA AATTCTTCAG TAGGCTTTGT GGTTGATGAT
ATCGATCTGT CTGGTTTAGG CATGGTGTCT AGCATGTATG ACTTGCAACA AGTTGAAGTG
CTACGAGGGC CTCAGGGGAC ACGTTATGGG GCTAATGCAC TAGCGGGTCT TATCTATCTG
AAGAGCAATG ATCCAACGGA TGTTTTTGAA AATGGGGCAG AGGTGTCATT GGGTGATGAC
AATCTACAAA CCTTCAGTGG TTTCAGCTCT GGTCCGTTAA CCGATTCTGG CAATCTGCTT
TATCGTGTCT CACTGCAGCA ACATCAACAA GATGGCTACC GAGACAATCT TTATCTTGAC
CGTAGCGACA CCAATAACCG CGATGAATTT ACCGGCCGCG CAAAACTTCG TTGGTACGCA
ACCGATGACT TAGCAATTGA TTTAACCTTG CTGCATGCCA ACTACGACAA TGGTTATGAC
GCCTGGACAT TAGACAATAA TGGCTTCGAT ACCTTAACCG ATGCTCCGGG TGAGGATAAA
CAGCGCACTA CGGGCTCTTC ACTTAAGTTT ACCTATACAG GTGCACAGAA TTTCGAGCTG
ACCTCTCTCA CATCATTTGC AAATTCTGAT ACTCGTCATA ATTACGATGG TGACTGGGCA
AATCCTGATT ATTGGGAAAG TCGAGATTGC GGTGGTGTGC CTTGTGAATA TGAATATAAC
TGGGATAAGA AAGGCGAAAG AAAGACTGTA ACTCAAGAGT TTAGATTATC TTCTACCGAA
TCGGGTCGCA TTTTTGCCGA TAGTACCGAC TGGCTAATTG GCGTTTATGG CATGGATCTG
CAAGAGGATA ACGAAACCAT AGACAGTTAC AGTCAGTTAT CCGCCGAGTA TGAGGCGCGA
AATTACGCCG TGTTTGCTCA ATTAGACTCT GATTTAGGCG CAAGTTATGC ACTTTCCGTC
GGTCTGCGTG CCGAGCGTAG AGACAGTGAT TATAGTGACT CAGCAGGCGA CAGTTTTGAT
CCAAGTGAAA CCATGTGGGG CGGCCATATT GCCCTTAGCA AGGCGTTAGC TGAAAACCAT
GAGTCATACA TACGTGTGGC ACGTGGCTAT AAAGCCGGTG GCTTTAACAT GTCGCTACCG
ATTGAGTTAG CTGACAAGAA AGAATACGAC ACAGAGATCC TTTACAACTA TGAGATAGGT
TTGAAGTCTA CTTGGCTAGA TGGTCAGGCA AGCACTAACT TAGCGCTATT CTATATGGAT
AGACAAGATC AGCAGGTGGC GGCGTCACAG CAATCAACTG TGCCGGGTGA AGAGGGTAAC
TTTATTCTGT TTACCGAAAA TGCAGGTAGC TCACATAACT ATGGGGCTGA ATTAGAGGGT
AATTGGTACG CGACCGATAA CCTGAATTTA TACGGCAGTG TCGGCTGGCT TGAAACCGAA
TATGGTGATT ACCAGTACGA AGATAAGTAT GGCACCCTGG TTGATCTATC TGGTCGAGAA
CTTGCGCACT CACCTAACTT TACCTTCAGC CTAGGGGCAA CTTACCGTAG TGACAACGGC
TGGTTTGCAA ACCTTAACAC TAGCGGTAAG AGTGATTTTT ACTACTCAGA CAGTAATGAA
TCTAAATCTG ATGCGTATCA GATTTTTAAT GCCAAATTGG GTTACGAGGC TGACATCTGG
TCTGTTTACC TGTGGGGGCG TAATTTATTT GATGAAAAAT ACGGTGTTCG CGGTTTCTAC
TTCGGTAATG AACCCGATTT AGATTGGGCC GATAAGCAAT ATATACGTTA TGGCGATCCG
CGCCAGATTG GTATGACGTT TAACGTTAAG TTTTTGTAA
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| Protein sequence | MLTLKTYSPV ALAIIAAISS PNALANELGS PVSDDIEVMV VTSDFRGSAL EKMPSSVTVI
DQQQIEDEGA QHFEDILNNI ANFNWSGGSS RPKYFQIRGV GEQEEYQGAP NSSVGFVVDD
IDLSGLGMVS SMYDLQQVEV LRGPQGTRYG ANALAGLIYL KSNDPTDVFE NGAEVSLGDD
NLQTFSGFSS GPLTDSGNLL YRVSLQQHQQ DGYRDNLYLD RSDTNNRDEF TGRAKLRWYA
TDDLAIDLTL LHANYDNGYD AWTLDNNGFD TLTDAPGEDK QRTTGSSLKF TYTGAQNFEL
TSLTSFANSD TRHNYDGDWA NPDYWESRDC GGVPCEYEYN WDKKGERKTV TQEFRLSSTE
SGRIFADSTD WLIGVYGMDL QEDNETIDSY SQLSAEYEAR NYAVFAQLDS DLGASYALSV
GLRAERRDSD YSDSAGDSFD PSETMWGGHI ALSKALAENH ESYIRVARGY KAGGFNMSLP
IELADKKEYD TEILYNYEIG LKSTWLDGQA STNLALFYMD RQDQQVAASQ QSTVPGEEGN
FILFTENAGS SHNYGAELEG NWYATDNLNL YGSVGWLETE YGDYQYEDKY GTLVDLSGRE
LAHSPNFTFS LGATYRSDNG WFANLNTSGK SDFYYSDSNE SKSDAYQIFN AKLGYEADIW
SVYLWGRNLF DEKYGVRGFY FGNEPDLDWA DKQYIRYGDP RQIGMTFNVK FL
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