Gene Spea_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1825 
Symbol 
ID5662220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2224937 
End bp2225443 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content46% 
IMG OID641236415 
Productthioesterase superfamily protein 
Protein accessionYP_001501683 
Protein GI157961649 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00014804 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAA CTAGTGAGCA GGGCTCATTA ACAGGCATGG CGAGCCGGTT CGTTGAGCAG 
TTGACCCAAT GCCGTAAACT TAAACTCAAA GTATTAGAAG CGAGTGGCAA AAAGGTGTTG
ATGGAGTTGC CTTATGACGC ACAACTTGTC GGCTATCCTG ATACTGGCGT GATCCATGGT
GGGGTGATCA CCACCTTAAT GGACACTGCA AGTGGTTGCG CCGTGGTGTG CTCTATTTTT
GATAAGTTTC AATTATTAGA GATTTCTCCG ACACTGGATC TACGTGTCGA CTATATGAAG
CCAGCCGAGC CCCACAAGCC TGTTTATGGT TTTGCCGAGT GTTATAAATT GTCTTCAAGT
GTCGCCTTTA CTCGCGCAAT TGCTTATCAA GACTCCATTG ATAATCCTAT TGCTCATGCA
GTTGGCTCGT TTATGCGGAT CAGTCCTGAG ATGGTCGGTG AAGAGTTTCG ATTGGCGTTA
ATGGGAGAAG CTGATGACAA TGCATGA
 
Protein sequence
MSLTSEQGSL TGMASRFVEQ LTQCRKLKLK VLEASGKKVL MELPYDAQLV GYPDTGVIHG 
GVITTLMDTA SGCAVVCSIF DKFQLLEISP TLDLRVDYMK PAEPHKPVYG FAECYKLSSS
VAFTRAIAYQ DSIDNPIAHA VGSFMRISPE MVGEEFRLAL MGEADDNA